RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 GCLCP48506 637 aaPredicted RBP19.78■□□□□ 0.76
LINC00240-203ENST00000606878 IRX3P78415 501 aaPredicted RBP19.78■□□□□ 0.76
LINC00240-203ENST00000606878 ACER1Q8TDN7 264 aa19.78■□□□□ 0.76
LINC00240-203ENST00000606878 NAPBQ9H115 298 aa19.78■□□□□ 0.76
LINC00240-203ENST00000606878 ASCC2Q9H1I8 757 aaPredicted RBP19.78■□□□□ 0.76
LINC00240-203ENST00000606878 HPS5Q9UPZ3 1129 aa19.78■□□□□ 0.76
LINC00240-203ENST00000606878 PTPN22Q9Y2R2 807 aa19.78■□□□□ 0.76
LINC00240-203ENST00000606878 MYH7P12883 1935 aa19.77■□□□□ 0.76
LINC00240-203ENST00000606878 FMNL1O95466 1100 aaPredicted RBP19.77■□□□□ 0.76
LINC00240-203ENST00000606878 SLC3A2P08195 630 aaKnown RBP19.77■□□□□ 0.76
LINC00240-203ENST00000606878 SDSP20132 328 aa19.77■□□□□ 0.76
LINC00240-203ENST00000606878 HOXD10P28358 340 aa19.77■□□□□ 0.76
LINC00240-203ENST00000606878 PSMC4P43686 418 aa19.77■□□□□ 0.76
LINC00240-203ENST00000606878 CCDC129Q6ZRS4 1044 aa19.77■□□□□ 0.76
LINC00240-203ENST00000606878 STK11IPQ8N1F8 1099 aa19.77■□□□□ 0.76
LINC00240-203ENST00000606878 EPB41L4AQ9HCS5 686 aaPredicted RBP19.77■□□□□ 0.76
LINC00240-203ENST00000606878 ZYXQ15942 572 aaKnown RBP19.76■□□□□ 0.75
LINC00240-203ENST00000606878 ZNF444Q8N0Y2 327 aaPredicted RBP19.76■□□□□ 0.75
LINC00240-203ENST00000606878 C12orf42Q96LP6 360 aa19.76■□□□□ 0.75
LINC00240-203ENST00000606878 FAM227BQ96M60 508 aa19.76■□□□□ 0.75
LINC00240-203ENST00000606878 P2RX7Q99572 595 aaKnown RBP19.76■□□□□ 0.75
LINC00240-203ENST00000606878 KANSL2Q9H9L4 492 aa19.76■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L15C9J2P7 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L13C9JLJ4 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L11C9JVI0 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L18D6R9N7 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L22D6RA61 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L17D6RBQ6 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L19D6RCP7 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L20D6RJB6 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 HIP1O00291 1037 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 ECM2O94769 699 aaPredicted RBP19.75■□□□□ 0.75
LINC00240-203ENST00000606878 PDE4AP27815 886 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 PRMT2P55345 433 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 FCGRTP55899 365 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 CAP1Q01518 475 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 USP17L24Q0WX57 530 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 NMIQ13287 307 aaPredicted RBP19.75■□□□□ 0.75
LINC00240-203ENST00000606878 ANKRD13CQ8N6S4 541 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 ARHGAP39Q9C0H5 1083 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 ARHGEF10LQ9HCE6 1279 aa19.75■□□□□ 0.75
LINC00240-203ENST00000606878 PHIPQ8WWQ0 1821 aa19.74■□□□□ 0.75
LINC00240-203ENST00000606878 MFAP1P55081 439 aaKnown RBP19.74■□□□□ 0.75
LINC00240-203ENST00000606878 PDE4BQ07343 736 aa19.74■□□□□ 0.75
LINC00240-203ENST00000606878 SH2D4AQ9H788 454 aa19.74■□□□□ 0.75
LINC00240-203ENST00000606878 NAV1Q8NEY1 1877 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 A0A0D9SFI3 127 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 A0A1W2PRG0 241 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 ICA1Q05084 483 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 PPARAQ07869 468 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 ALX1Q15699 326 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 FAM110CQ1W6H9 321 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 SIAH1Q8IUQ4 282 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 TRIM47Q96LD4 638 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 DIAPH3Q9NSV4 1193 aa19.73■□□□□ 0.75
LINC00240-203ENST00000606878 RASA1P20936 1047 aa19.72■□□□□ 0.75
LINC00240-203ENST00000606878 ATP2B2Q01814 1243 aa19.72■□□□□ 0.75
LINC00240-203ENST00000606878 VPS53Q5VIR6 699 aa19.72■□□□□ 0.75
LINC00240-203ENST00000606878 CATSPERGQ6ZRH7 1159 aa19.72■□□□□ 0.75
LINC00240-203ENST00000606878 GTF3C2Q8WUA4 911 aaPredicted RBP19.72■□□□□ 0.75
LINC00240-203ENST00000606878 TMX2Q9Y320 296 aa19.72■□□□□ 0.75
LINC00240-203ENST00000606878 BAZ2AQ9UIF9 1905 aaKnown RBP19.72■□□□□ 0.75
LINC00240-203ENST00000606878 EEF2P13639 858 aaKnown RBP19.71■□□□□ 0.75
LINC00240-203ENST00000606878 VCAM1P19320 739 aa19.71■□□□□ 0.75
LINC00240-203ENST00000606878 CTGFP29279 349 aa19.71■□□□□ 0.75
LINC00240-203ENST00000606878 HERVK_113P62684 666 aa19.71■□□□□ 0.75
LINC00240-203ENST00000606878 TTC22Q5TAA0 569 aa19.71■□□□□ 0.75
LINC00240-203ENST00000606878 CWC27Q6UX04 472 aaKnown RBP19.71■□□□□ 0.75
LINC00240-203ENST00000606878 SRRDQ9UH36 339 aa19.71■□□□□ 0.75
LINC00240-203ENST00000606878 ATAD5Q96QE3 1844 aa19.71■□□□□ 0.75
LINC00240-203ENST00000606878 DDX60LQ5H9U9 1706 aaKnown RBP19.71■□□□□ 0.75
LINC00240-203ENST00000606878 ROBO3Q96MS0 1386 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 FOXP2O15409 715 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 PRDM1O75626 825 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 FGAP02671 866 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 HSPD1P10809 573 aaKnown RBP19.7■□□□□ 0.74
LINC00240-203ENST00000606878 NBPF11Q86T75 865 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 GPRC5AQ8NFJ5 357 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 LPAR1Q92633 364 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.7■□□□□ 0.74
LINC00240-203ENST00000606878 RPAP3Q9H6T3 665 aaPredicted RBP19.7■□□□□ 0.74
LINC00240-203ENST00000606878 HOXC10Q9NYD6 342 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 PTCH2Q9Y6C5 1203 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 CCDC171Q6TFL3 1326 aa19.7■□□□□ 0.74
LINC00240-203ENST00000606878 PTPRFP10586 1907 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 TNPO2O14787 897 aaKnown RBP19.69■□□□□ 0.74
LINC00240-203ENST00000606878 COG2Q14746 738 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 ZNF589Q86UQ0 364 aaPredicted RBP19.69■□□□□ 0.74
LINC00240-203ENST00000606878 CLEC10AQ8IUN9 316 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 COA7Q96BR5 231 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 VCPKMTQ9H867 229 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 RBPJLQ9UBG7 517 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 MORF4L1Q9UBU8 362 aa19.69■□□□□ 0.74
LINC00240-203ENST00000606878 SLC9C1Q4G0N8 1177 aa19.68■□□□□ 0.74
LINC00240-203ENST00000606878 CENPQQ7L2Z9 268 aaPredicted RBP19.68■□□□□ 0.74
LINC00240-203ENST00000606878 CCAR1Q8IX12 1150 aaKnown RBP19.68■□□□□ 0.74
LINC00240-203ENST00000606878 RAET1EQ8TD07 263 aa19.68■□□□□ 0.74
LINC00240-203ENST00000606878 GOPCQ9HD26 462 aa19.68■□□□□ 0.74
LINC00240-203ENST00000606878 NYAP2Q9P242 653 aa19.68■□□□□ 0.74
LINC00240-203ENST00000606878 ANAPC4Q9UJX5 808 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms