RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 KIAA1683Q9H0B3 1180 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 NAPBQ9H115 298 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 BCRP11274 1271 aa19.97■□□□□ 0.79
SSBP4-213ENST00000602088 HOXA7P31268 230 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-213ENST00000602088 LACTBP83111 547 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-213ENST00000602088 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
SSBP4-213ENST00000602088 SMCR8Q8TEV9 937 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-213ENST00000602088 C12orf42Q96LP6 360 aa19.97■□□□□ 0.79
SSBP4-213ENST00000602088 ASCC2Q9H1I8 757 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-213ENST00000602088 EFCC1Q9HA90 598 aa19.97■□□□□ 0.79
SSBP4-213ENST00000602088 PNMA3Q9UL41 463 aa19.97■□□□□ 0.79
SSBP4-213ENST00000602088 TRIM17Q9Y577 477 aa19.97■□□□□ 0.79
SSBP4-213ENST00000602088 GSPT1P15170 499 aaKnown RBP19.96■□□□□ 0.79
SSBP4-213ENST00000602088 RASA1P20936 1047 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 OSBPP22059 807 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 USP14P54578 494 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 ARHGEF6Q15052 776 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 ZNF589Q86UQ0 364 aaPredicted RBP19.96■□□□□ 0.79
SSBP4-213ENST00000602088 SIAH1Q8IUQ4 282 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 STK11IPQ8N1F8 1099 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 FEZ1Q99689 392 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 MKNK2Q9HBH9 465 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 HTTP42858 3142 aa19.96■□□□□ 0.79
SSBP4-213ENST00000602088 A0A1W2PRG0 241 aa19.95■□□□□ 0.78
SSBP4-213ENST00000602088 HIP1O00291 1037 aa19.95■□□□□ 0.78
SSBP4-213ENST00000602088 KIF22Q14807 665 aa19.95■□□□□ 0.78
SSBP4-213ENST00000602088 ALX1Q15699 326 aa19.95■□□□□ 0.78
SSBP4-213ENST00000602088 ZYXQ15942 572 aaKnown RBP19.95■□□□□ 0.78
SSBP4-213ENST00000602088 FBXO46Q6PJ61 603 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-213ENST00000602088 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-213ENST00000602088 PPARAQ07869 468 aa19.94■□□□□ 0.78
SSBP4-213ENST00000602088 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.94■□□□□ 0.78
SSBP4-213ENST00000602088 ARHGAP39Q9C0H5 1083 aa19.94■□□□□ 0.78
SSBP4-213ENST00000602088 ZNF287Q9HBT7 754 aa19.94■□□□□ 0.78
SSBP4-213ENST00000602088 DIAPH3Q9NSV4 1193 aa19.94■□□□□ 0.78
SSBP4-213ENST00000602088 CCDC171Q6TFL3 1326 aa19.94■□□□□ 0.78
SSBP4-213ENST00000602088 FGAP02671 866 aa19.93■□□□□ 0.78
SSBP4-213ENST00000602088 HSPD1P10809 573 aaKnown RBP19.93■□□□□ 0.78
SSBP4-213ENST00000602088 GCLCP48506 637 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-213ENST00000602088 MFAP1P55081 439 aaKnown RBP19.93■□□□□ 0.78
SSBP4-213ENST00000602088 IRX3P78415 501 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-213ENST00000602088 ICA1Q05084 483 aa19.93■□□□□ 0.78
SSBP4-213ENST00000602088 CWC27Q6UX04 472 aaKnown RBP19.93■□□□□ 0.78
SSBP4-213ENST00000602088 CLEC10AQ8IUN9 316 aa19.93■□□□□ 0.78
SSBP4-213ENST00000602088 P2RX7Q99572 595 aaKnown RBP19.93■□□□□ 0.78
SSBP4-213ENST00000602088 KANSL2Q9H9L4 492 aa19.93■□□□□ 0.78
SSBP4-213ENST00000602088 PTPN22Q9Y2R2 807 aa19.93■□□□□ 0.78
SSBP4-213ENST00000602088 PRDM1O75626 825 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 CAPN15O75808 1086 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 SLC3A2P08195 630 aaKnown RBP19.92■□□□□ 0.78
SSBP4-213ENST00000602088 VCAM1P19320 739 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 CTGFP29279 349 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 PDE4BQ07343 736 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 ZNF444Q8N0Y2 327 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-213ENST00000602088 TRIM47Q96LD4 638 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 ARHGEF10LQ9HCE6 1279 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 ANAPC4Q9UJX5 808 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 HPS5Q9UPZ3 1129 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 TMX2Q9Y320 296 aa19.92■□□□□ 0.78
SSBP4-213ENST00000602088 ZSWIM8A7E2V4 1837 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L15C9J2P7 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L13C9JLJ4 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L11C9JVI0 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L18D6R9N7 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L22D6RA61 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L17D6RBQ6 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L19D6RCP7 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L20D6RJB6 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 GNRH1P01148 92 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 EEF2P13639 858 aaKnown RBP19.91■□□□□ 0.78
SSBP4-213ENST00000602088 PSMC4P43686 418 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 HERVK_113P62684 666 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 USP17L24Q0WX57 530 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 FAM110CQ1W6H9 321 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 ANKRD13CQ8N6S4 541 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 SH2D4AQ9H788 454 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 GREB1LQ9C091 1923 aaPredicted RBP19.91■□□□□ 0.78
SSBP4-213ENST00000602088 ZMYM6O95789 1325 aa19.91■□□□□ 0.78
SSBP4-213ENST00000602088 ECM2O94769 699 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-213ENST00000602088 CTDSPL2Q05D32 466 aa19.9■□□□□ 0.78
SSBP4-213ENST00000602088 CATSPERGQ6ZRH7 1159 aa19.9■□□□□ 0.78
SSBP4-213ENST00000602088 KIAA1755Q5JYT7 1200 aa19.89■□□□□ 0.77
SSBP4-213ENST00000602088 RPAP3Q9H6T3 665 aaPredicted RBP19.89■□□□□ 0.77
SSBP4-213ENST00000602088 VCPKMTQ9H867 229 aa19.89■□□□□ 0.77
SSBP4-213ENST00000602088 MORF4L1Q9UBU8 362 aa19.89■□□□□ 0.77
SSBP4-213ENST00000602088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.89■□□□□ 0.771e-6■■■□□ 16.2
SSBP4-213ENST00000602088 IGKV6D-41A0A0C4DH26 115 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 CCDC85CA6NKD9 419 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 FMNL1O95466 1100 aaPredicted RBP19.88■□□□□ 0.77
SSBP4-213ENST00000602088 NEFLP07196 543 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 FCGRTP55899 365 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 ATP2B2Q01814 1243 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 NEDD1Q8NHV4 660 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 LPAR1Q92633 364 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 INCENPQ9NQS7 918 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 NYAP2Q9P242 653 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 TACC3Q9Y6A5 838 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 CENPFP49454 3210 aa19.88■□□□□ 0.77
SSBP4-213ENST00000602088 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms