RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
SHKBP1-227ENST00000602011 TRIB2Q92519 343 aa21.64■■□□□ 1.05
SHKBP1-227ENST00000602011 FEZ1Q99689 392 aa21.64■■□□□ 1.05
SHKBP1-227ENST00000602011 TLR7Q9NYK1 1049 aaKnown RBP21.64■■□□□ 1.05
SHKBP1-227ENST00000602011 HMMRO75330 724 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 ABCB5Q2M3G0 1257 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 LBX2Q6XYB7 198 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 MIGA1Q8NAN2 632 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 USP6NLQ92738 828 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 GDF15Q99988 308 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 TXNRD2Q9NNW7 524 aa21.63■■□□□ 1.05
SHKBP1-227ENST00000602011 ZKSCAN1P17029 563 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 BMP8BP34820 402 aa21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 Q3C1V9 767 aa21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 CATSPERGQ6ZRH7 1159 aa21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 GPR142Q7Z601 462 aa21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 KIF1BPQ96EK5 621 aa21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 DDX60LQ5H9U9 1706 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-227ENST00000602011 MAST2Q6P0Q8 1798 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 MAGEB6P1A0A0J9YX57 407 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 DLL1O00548 723 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 POLR3DP05423 398 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 PRKAR2AP13861 404 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 MORN1Q5T089 497 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 RHPN1Q8TCX5 695 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 CRNKL1Q9BZJ0 848 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 C11orf49Q9H6J7 331 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 EXOC6BQ9Y2D4 811 aa21.61■■□□□ 1.05
SHKBP1-227ENST00000602011 RAB3GAP1Q15042 981 aa21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 Q7L0L9 218 aa21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 EDC3Q96F86 508 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 APBA2Q99767 749 aa21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 RIOK1Q9BRS2 568 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 PAGR1Q9BTK6 254 aa21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 ANTXR1Q9H6X2 564 aa21.6■■□□□ 1.05
SHKBP1-227ENST00000602011 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
SHKBP1-227ENST00000602011 RAB11FIP3O75154 756 aa21.59■■□□□ 1.05
SHKBP1-227ENST00000602011 MAP2K5Q13163 448 aa21.59■■□□□ 1.05
SHKBP1-227ENST00000602011 SLC9C2Q5TAH2 1124 aa21.59■■□□□ 1.05
SHKBP1-227ENST00000602011 HOXC10Q9NYD6 342 aa21.59■■□□□ 1.05
SHKBP1-227ENST00000602011 SLC15A5A6NIM6 579 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 IFIT2P09913 472 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 MAGEA10P43363 369 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 CCL14Q16627 93 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 MFSD14CQ5VZR4 134 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 POTEEQ6S8J3 1075 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 PORCNQ9H237 461 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 DDX19BQ9UMR2 479 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 IVNS1ABPQ9Y6Y0 642 aa21.58■■□□□ 1.05
SHKBP1-227ENST00000602011 A0A0C4DFX4 3053 aa21.58■■□□□ 1.04
SHKBP1-227ENST00000602011 PFASO15067 1338 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 MSCO60682 206 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 HOXC6P09630 235 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 SHMT1P34896 483 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 PLCD1P51178 756 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 GABPAQ06546 454 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 CACNB2Q08289 660 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 GPR153Q6NV75 609 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 SWAP70Q9UH65 585 aa21.57■■□□□ 1.04
SHKBP1-227ENST00000602011 CDK5RAP2Q96SN8 1893 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 STRNO43815 780 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 PDE6AP16499 860 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 VCAM1P19320 739 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 PTPREP23469 700 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 COG2Q14746 738 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 MCM9Q9NXL9 1143 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 FOCADQ5VW36 1801 aa21.56■■□□□ 1.04
SHKBP1-227ENST00000602011 CCND3P30281 292 aaPredicted RBP21.55■■□□□ 1.04
SHKBP1-227ENST00000602011 MIER1Q8N108 512 aa21.55■■□□□ 1.04
SHKBP1-227ENST00000602011 DEFB123Q8N688 67 aa21.55■■□□□ 1.04
SHKBP1-227ENST00000602011 IL1RAPL2Q9NP60 686 aa21.55■■□□□ 1.04
SHKBP1-227ENST00000602011 NDUFB9Q9Y6M9 179 aa21.55■■□□□ 1.04
SHKBP1-227ENST00000602011 ZYXQ15942 572 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 LHX8Q68G74 356 aa21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 TMEM179Q6ZVK1 233 aa21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 MB21D1Q8N884 522 aa21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 ACER1Q8TDN7 264 aa21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.54■■□□□ 1.041e-6■■■■□ 20.5
SHKBP1-227ENST00000602011 ATP8A2Q9NTI2 1148 aa21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 ZNF532Q9HCE3 1301 aa21.54■■□□□ 1.04
SHKBP1-227ENST00000602011 CNMDO75829 334 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 COL6A1P12109 1028 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 ATP2B2Q01814 1243 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 AMOTL1Q8IY63 956 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 LPAR1Q92633 364 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 CCDC17Q96LX7 622 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 RPAP3Q9H6T3 665 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 SH2D4AQ9H788 454 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 DCP1AQ9NPI6 582 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 SLC5A4Q9NY91 659 aa21.53■■□□□ 1.04
SHKBP1-227ENST00000602011 GOLIM4O00461 696 aa21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 GUCY1A2P33402 732 aa21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 GRB14Q14449 540 aa21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 SEPT2Q15019 361 aa21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 SHCBP1Q8NEM2 672 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms