RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 PLCD1P51178 756 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 PPARAQ07869 468 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 SLC9C1Q4G0N8 1177 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 SWAP70Q9UH65 585 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 SERPINB13Q9UIV8 391 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 ADGRA2Q96PE1 1338 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 MYH8P13535 1937 aa13.82□□□□□ -0.2
CHMP2A-207ENST00000600804 TLR2O60603 784 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 CYP21A2P08686 494 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 MCCP23508 829 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 ANAPC15P60006 121 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 LACTBP83111 547 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 STAG1Q8WVM7 1258 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 RNF41Q9H4P4 317 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-207ENST00000600804 MINDY4BA8MYZ0 360 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 H0YGN5 161 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 SLC27A2O14975 620 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 ORC4O43929 436 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 MOGSQ13724 837 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 MTFR1Q15390 333 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 DCAF15Q66K64 600 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 ERO1BQ86YB8 467 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 ZSCAN29Q8IWY8 852 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 UPF2Q9HAU5 1272 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 CSADQ9Y600 493 aa13.8□□□□□ -0.2
CHMP2A-207ENST00000600804 CYP2D6P10635 497 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 ZKSCAN1P17029 563 aaPredicted RBP13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 INPP5BP32019 993 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 PDE4BQ07343 736 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 PPIL2Q13356 520 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 KRT32Q14532 448 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 C17orf99Q6UX52 265 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 GINM1Q9NU53 330 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 ZNF112Q9UJU3 913 aa13.79□□□□□ -0.2
CHMP2A-207ENST00000600804 PLXNB2O15031 1838 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 CYP2D7A0A087X1C5 515 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 CETPP11597 493 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 CDK8P49336 464 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 SLC4A8Q2Y0W8 1093 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 MIGA2Q7L4E1 593 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 CNNM2Q9H8M5 875 aa13.78□□□□□ -0.2
CHMP2A-207ENST00000600804 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 SHMT1P34896 483 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 HAND2P61296 217 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 MFSD6Q6ZSS7 791 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 UBE2Q1Q7Z7E8 422 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 TBC1D10CQ8IV04 446 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 CRACR2BQ8N4Y2 399 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 CCDC17Q96LX7 622 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 MTA3Q9BTC8 594 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 GREB1LQ9C091 1923 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 ZCCHC17Q9NP64 241 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 CPA4Q9UI42 421 aa13.77□□□□□ -0.21
CHMP2A-207ENST00000600804 PLIN4Q96Q06 1357 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 PHF20L1A8MW92 1017 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 E7EWF7 191 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 EVX2Q03828 476 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 SNAPC2Q13487 334 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 DYNLL2Q96FJ2 89 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 TRIM34Q9BYJ4 488 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 KRT23Q9C075 422 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
CHMP2A-207ENST00000600804 CTNND1O60716 968 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 HMGB1P09429 215 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 RASA1P20936 1047 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 OSBPP22059 807 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 PSMA5P28066 241 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 PPATQ06203 517 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 TRDNQ13061 729 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 NOL9Q5SY16 702 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 STOX1Q6ZVD7 989 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 NCOA7Q8NI08 942 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 ESR2Q92731 530 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms