RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 TSPY8P0CW00 308 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
FKRP-220ENST00000600646 HMGCS2P54868 508 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 IRX3P78415 501 aaPredicted RBP9.14□□□□□ -0.95
FKRP-220ENST00000600646 ICA1Q05084 483 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 MTMR2Q13614 643 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 IMMTQ16891 758 aaKnown RBP9.14□□□□□ -0.95
FKRP-220ENST00000600646 BMP2KLQ5H9B9 411 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 SH3D19Q5HYK7 790 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 STK11IPQ8N1F8 1099 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 ERO1AQ96HE7 468 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 PTPN18Q99952 460 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 DSCC1Q9BVC3 393 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 AGTPBP1Q9UPW5 1226 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 SIPA1L1O43166 1804 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 TSPY2A6NKD2 308 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 TLR2O60603 784 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 FGAP02671 866 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 CHMLP26374 656 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 ATP2B2Q01814 1243 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 SP3Q02447 781 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 CRHR2Q13324 411 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 SEPT2Q15019 361 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 MFSD6Q6ZSS7 791 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 FAM43AQ8N2R8 423 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 SLC44A5Q8NCS7 719 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
FKRP-220ENST00000600646 LPAR1Q92633 364 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 KIAA1683Q9H0B3 1180 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 EPB41L4AQ9HCS5 686 aaPredicted RBP9.13□□□□□ -0.95
FKRP-220ENST00000600646 GOPCQ9HD26 462 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 ANAPC4Q9UJX5 808 aa9.13□□□□□ -0.95
FKRP-220ENST00000600646 USP17L15C9J2P7 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L13C9JLJ4 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L11C9JVI0 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L18D6R9N7 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L22D6RA61 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L17D6RBQ6 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L19D6RCP7 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L20D6RJB6 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 RANBP6O60518 1105 aaKnown RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 AKR1B1P15121 316 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 GCLCP48506 637 aaPredicted RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 USP17L24Q0WX57 530 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 TRDNQ13061 729 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 PKN2Q16513 984 aaKnown RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 CCDC178Q5BJE1 867 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 VPS53Q5VIR6 699 aa9.12□□□□□ -0.95
FKRP-220ENST00000600646 ZNF589Q86UQ0 364 aaPredicted RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 CCDC84Q86UT8 332 aaPredicted RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 CCAR1Q8IX12 1150 aaKnown RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 U3KPZ7 1027 aaPredicted RBP9.12□□□□□ -0.95
FKRP-220ENST00000600646 RAD21O60216 631 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 CDC45O75419 566 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 TTLL1O95922 423 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 GNRH1P01148 92 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 RASA1P20936 1047 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 HOXD10P28358 340 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 HOXA7P31268 230 aaPredicted RBP9.11□□□□□ -0.95
FKRP-220ENST00000600646 TFAP4Q01664 338 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 ZYXQ15942 572 aaKnown RBP9.11□□□□□ -0.95
FKRP-220ENST00000600646 RRP12Q5JTH9 1297 aaKnown RBP9.11□□□□□ -0.95
FKRP-220ENST00000600646 AKNAD1Q5T1N1 836 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 IQCA1Q86XH1 822 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 ZNF296Q8WUU4 475 aaPredicted RBP9.11□□□□□ -0.95
FKRP-220ENST00000600646 ESR2Q92731 530 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 C12orf42Q96LP6 360 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 KRT23Q9C075 422 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 CWC22Q9HCG8 908 aaKnown RBP9.11□□□□□ -0.95
FKRP-220ENST00000600646 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
FKRP-220ENST00000600646 SYNPO2Q9UMS6 1093 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 TMX2Q9Y320 296 aa9.11□□□□□ -0.95
FKRP-220ENST00000600646 PHIPQ8WWQ0 1821 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 CEP350Q5VT06 3117 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 SGSM2O43147 1006 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 ORC4O43929 436 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 PRDM1O75626 825 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 EEF2P13639 858 aaKnown RBP9.1□□□□□ -0.95
FKRP-220ENST00000600646 CTDSPL2Q05D32 466 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 RNF20Q5VTR2 975 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 GPAT2Q6NUI2 795 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 CTU1Q7Z7A3 348 aaKnown RBP9.1□□□□□ -0.95
FKRP-220ENST00000600646 TNS4Q8IZW8 715 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 STAG1Q8WVM7 1258 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 TANGO6Q9C0B7 1094 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 VCPKMTQ9H867 229 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 HOXC10Q9NYD6 342 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 NYAP2Q9P242 653 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 CLIP2Q9UDT6 1046 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 STX8Q9UNK0 236 aa9.1□□□□□ -0.95
FKRP-220ENST00000600646 CTDP1Q9Y5B0 961 aaPredicted RBP9.1□□□□□ -0.95
FKRP-220ENST00000600646 WDR46O15213 610 aaKnown RBP9.09□□□□□ -0.95
FKRP-220ENST00000600646 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
FKRP-220ENST00000600646 CYP2C8P10632 490 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms