RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MKNK2Q9HBH9 465 aa33.65■■■□□ 2.98
SSBP4-206ENST00000599699 ADGRA2Q96PE1 1338 aa33.64■■■□□ 2.98
SSBP4-206ENST00000599699 OSBPP22059 807 aa33.64■■■□□ 2.98
SSBP4-206ENST00000599699 ARHGEF6Q15052 776 aa33.64■■■□□ 2.98
SSBP4-206ENST00000599699 ACER1Q8TDN7 264 aa33.64■■■□□ 2.98
SSBP4-206ENST00000599699 EFCC1Q9HA90 598 aa33.64■■■□□ 2.98
SSBP4-206ENST00000599699 DIAPH3Q9NSV4 1193 aa33.64■■■□□ 2.98
SSBP4-206ENST00000599699 NEFLP07196 543 aa33.63■■■□□ 2.97
SSBP4-206ENST00000599699 USP14P54578 494 aa33.63■■■□□ 2.97
SSBP4-206ENST00000599699 OTOP1Q7RTM1 612 aa33.63■■■□□ 2.97
SSBP4-206ENST00000599699 ECM2O94769 699 aaPredicted RBP33.62■■■□□ 2.97
SSBP4-206ENST00000599699 TTC22Q5TAA0 569 aa33.62■■■□□ 2.97
SSBP4-206ENST00000599699 EMILIN3Q9NT22 766 aa33.62■■■□□ 2.97
SSBP4-206ENST00000599699 HIP1O00291 1037 aa33.61■■■□□ 2.97
SSBP4-206ENST00000599699 IRX3P78415 501 aaPredicted RBP33.61■■■□□ 2.97
SSBP4-206ENST00000599699 LACTBP83111 547 aaPredicted RBP33.61■■■□□ 2.97
SSBP4-206ENST00000599699 VPS53Q5VIR6 699 aa33.61■■■□□ 2.97
SSBP4-206ENST00000599699 KIAA1683Q9H0B3 1180 aa33.61■■■□□ 2.97
SSBP4-206ENST00000599699 ASCC2Q9H1I8 757 aaPredicted RBP33.61■■■□□ 2.97
SSBP4-206ENST00000599699 ZNF287Q9HBT7 754 aa33.61■■■□□ 2.97
SSBP4-206ENST00000599699 LOC285556D6RIA3 1793 aa33.61■■■□□ 2.97
SSBP4-206ENST00000599699 ROBO3Q96MS0 1386 aa33.6■■■□□ 2.97
SSBP4-206ENST00000599699 SLC3A2P08195 630 aaKnown RBP33.6■■■□□ 2.97
SSBP4-206ENST00000599699 MFAP1P55081 439 aaKnown RBP33.59■■■□□ 2.97
SSBP4-206ENST00000599699 ICA1Q05084 483 aa33.59■■■□□ 2.97
SSBP4-206ENST00000599699 CWC27Q6UX04 472 aaKnown RBP33.59■■■□□ 2.97
SSBP4-206ENST00000599699 CENPQQ7L2Z9 268 aaPredicted RBP33.59■■■□□ 2.97
SSBP4-206ENST00000599699 CCDC171Q6TFL3 1326 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 FOXP2O15409 715 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 BCRP11274 1271 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 GSPT1P15170 499 aaKnown RBP33.58■■■□□ 2.97
SSBP4-206ENST00000599699 PPARAQ07869 468 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 FBXO46Q6PJ61 603 aaPredicted RBP33.58■■■□□ 2.97
SSBP4-206ENST00000599699 ZNF589Q86UQ0 364 aaPredicted RBP33.58■■■□□ 2.97
SSBP4-206ENST00000599699 CLEC10AQ8IUN9 316 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 ARHGAP39Q9C0H5 1083 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 ARHGEF10LQ9HCE6 1279 aa33.58■■■□□ 2.97
SSBP4-206ENST00000599699 MYH8P13535 1937 aa33.57■■■□□ 2.97
SSBP4-206ENST00000599699 PRDM1O75626 825 aa33.57■■■□□ 2.96
SSBP4-206ENST00000599699 RASA1P20936 1047 aa33.57■■■□□ 2.96
SSBP4-206ENST00000599699 HOXA7P31268 230 aaPredicted RBP33.57■■■□□ 2.96
SSBP4-206ENST00000599699 CAP1Q01518 475 aa33.57■■■□□ 2.96
SSBP4-206ENST00000599699 ATP2B2Q01814 1243 aa33.57■■■□□ 2.96
SSBP4-206ENST00000599699 ZNF444Q8N0Y2 327 aaPredicted RBP33.57■■■□□ 2.96
SSBP4-206ENST00000599699 C12orf42Q96LP6 360 aa33.57■■■□□ 2.96
SSBP4-206ENST00000599699 A0A1W2PRG0 241 aa33.56■■■□□ 2.96
SSBP4-206ENST00000599699 CCDC85CA6NKD9 419 aa33.56■■■□□ 2.96
SSBP4-206ENST00000599699 CENPBP07199 599 aaPredicted RBP33.56■■■□□ 2.96
SSBP4-206ENST00000599699 PDE4BQ07343 736 aa33.56■■■□□ 2.96
SSBP4-206ENST00000599699 ANKRD13CQ8N6S4 541 aa33.56■■■□□ 2.96
SSBP4-206ENST00000599699 KANSL2Q9H9L4 492 aa33.56■■■□□ 2.96
SSBP4-206ENST00000599699 PSMC4P43686 418 aa33.55■■■□□ 2.96
SSBP4-206ENST00000599699 GCLCP48506 637 aaPredicted RBP33.55■■■□□ 2.96
SSBP4-206ENST00000599699 SH2D4AQ9H788 454 aa33.55■■■□□ 2.96
SSBP4-206ENST00000599699 FMNL1O95466 1100 aaPredicted RBP33.54■■■□□ 2.96
SSBP4-206ENST00000599699 HSPD1P10809 573 aaKnown RBP33.54■■■□□ 2.96
SSBP4-206ENST00000599699 VCAM1P19320 739 aa33.54■■■□□ 2.96
SSBP4-206ENST00000599699 ALX1Q15699 326 aa33.54■■■□□ 2.96
SSBP4-206ENST00000599699 HPS5Q9UPZ3 1129 aa33.54■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L15C9J2P7 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L13C9JLJ4 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L11C9JVI0 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L18D6R9N7 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L22D6RA61 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L17D6RBQ6 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L19D6RCP7 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L20D6RJB6 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 USP17L24Q0WX57 530 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 CCDC136Q96JN2 1154 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 P2RX7Q99572 595 aaKnown RBP33.53■■■□□ 2.96
SSBP4-206ENST00000599699 PTPN22Q9Y2R2 807 aa33.53■■■□□ 2.96
SSBP4-206ENST00000599699 EEF2P13639 858 aaKnown RBP33.52■■■□□ 2.96
SSBP4-206ENST00000599699 CTDSPL2Q05D32 466 aa33.52■■■□□ 2.96
SSBP4-206ENST00000599699 SIAH1Q8IUQ4 282 aa33.52■■■□□ 2.96
SSBP4-206ENST00000599699 FGAP02671 866 aa33.51■■■□□ 2.95
SSBP4-206ENST00000599699 FCGRTP55899 365 aa33.51■■■□□ 2.95
SSBP4-206ENST00000599699 HERVK_113P62684 666 aa33.51■■■□□ 2.95
SSBP4-206ENST00000599699 TRIM47Q96LD4 638 aa33.51■■■□□ 2.95
SSBP4-206ENST00000599699 RPAP3Q9H6T3 665 aaPredicted RBP33.51■■■□□ 2.95
SSBP4-206ENST00000599699 GNRH1P01148 92 aa33.5■■■□□ 2.95
SSBP4-206ENST00000599699 FAM110CQ1W6H9 321 aa33.5■■■□□ 2.95
SSBP4-206ENST00000599699 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.5■■■□□ 2.95
SSBP4-206ENST00000599699 TMX2Q9Y320 296 aa33.5■■■□□ 2.95
SSBP4-206ENST00000599699 CTGFP29279 349 aa33.49■■■□□ 2.95
SSBP4-206ENST00000599699 RAD21O60216 631 aa33.48■■■□□ 2.95
SSBP4-206ENST00000599699 TSPY3P0CV98 308 aa33.48■■■□□ 2.95
SSBP4-206ENST00000599699 TSPY8P0CW00 308 aa33.48■■■□□ 2.95
SSBP4-206ENST00000599699 HOXD10P28358 340 aa33.48■■■□□ 2.95
SSBP4-206ENST00000599699 CATSPERGQ6ZRH7 1159 aa33.48■■■□□ 2.95
SSBP4-206ENST00000599699 FAM47AQ5JRC9 791 aa33.47■■■□□ 2.95
SSBP4-206ENST00000599699 SPICE1Q8N0Z3 855 aa33.47■■■□□ 2.95
SSBP4-206ENST00000599699 LPAR1Q92633 364 aa33.47■■■□□ 2.95
SSBP4-206ENST00000599699 TANGO6Q9C0B7 1094 aa33.47■■■□□ 2.95
SSBP4-206ENST00000599699 VCPKMTQ9H867 229 aa33.47■■■□□ 2.95
SSBP4-206ENST00000599699 ANAPC4Q9UJX5 808 aa33.47■■■□□ 2.95
SSBP4-206ENST00000599699 TFAP4Q01664 338 aa33.46■■■□□ 2.95
SSBP4-206ENST00000599699 GTF3C2Q8WUA4 911 aaPredicted RBP33.46■■■□□ 2.95
SSBP4-206ENST00000599699 GOPCQ9HD26 462 aa33.46■■■□□ 2.95
SSBP4-206ENST00000599699 INCENPQ9NQS7 918 aa33.46■■■□□ 2.95
SSBP4-206ENST00000599699 ZMYM6O95789 1325 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms