RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 RAET1EQ8TD07 263 aa18.48■□□□□ 0.55
XRCC1-206ENST00000597811 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
XRCC1-206ENST00000597811 SEC62Q99442 399 aaKnown RBP18.48■□□□□ 0.55
XRCC1-206ENST00000597811 TMOD4Q9NZQ9 345 aa18.48■□□□□ 0.55
XRCC1-206ENST00000597811 GABRQQ9UN88 632 aa18.48■□□□□ 0.55
XRCC1-206ENST00000597811 PLXNB2O15031 1838 aa18.48■□□□□ 0.55
XRCC1-206ENST00000597811 C19orf81C9J6K1 198 aa18.47■□□□□ 0.55
XRCC1-206ENST00000597811 GNAT2P19087 354 aa18.47■□□□□ 0.55
XRCC1-206ENST00000597811 GABPAQ06546 454 aa18.47■□□□□ 0.55
XRCC1-206ENST00000597811 FAM110CQ1W6H9 321 aa18.47■□□□□ 0.55
XRCC1-206ENST00000597811 CERKLQ49MI3 558 aaPredicted RBP18.47■□□□□ 0.55
XRCC1-206ENST00000597811 TMEM106CQ9BVX2 250 aa18.47■□□□□ 0.55
XRCC1-206ENST00000597811 OSBPL3Q9H4L5 887 aa18.47■□□□□ 0.55
XRCC1-206ENST00000597811 USP17L12C9JPN9 530 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 USP17L21D6R901 530 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 CYP2D6P10635 497 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 PDE4AP27815 886 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 GRK4P32298 578 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 GCLCP48506 637 aaPredicted RBP18.46■□□□□ 0.55
XRCC1-206ENST00000597811 TDO2P48775 406 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 ZMYM1Q5SVZ6 1142 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 CENPQQ7L2Z9 268 aaPredicted RBP18.46■□□□□ 0.55
XRCC1-206ENST00000597811 EMILIN3Q9NT22 766 aa18.46■□□□□ 0.55
XRCC1-206ENST00000597811 MINDY4BA8MYZ0 360 aa18.45■□□□□ 0.54
XRCC1-206ENST00000597811 MPHOSPH10O00566 681 aaKnown RBP18.45■□□□□ 0.54
XRCC1-206ENST00000597811 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
XRCC1-206ENST00000597811 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
XRCC1-206ENST00000597811 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
XRCC1-206ENST00000597811 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
XRCC1-206ENST00000597811 MTFR1Q15390 333 aa18.45■□□□□ 0.54
XRCC1-206ENST00000597811 ABCB5Q2M3G0 1257 aa18.45■□□□□ 0.54
XRCC1-206ENST00000597811 NACAP1Q9BZK3 213 aa18.45■□□□□ 0.54
XRCC1-206ENST00000597811 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
XRCC1-206ENST00000597811 CEP290O15078 2479 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 GUCY1A2P33402 732 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 FLT3LGP49771 235 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 ZYXQ15942 572 aaKnown RBP18.44■□□□□ 0.54
XRCC1-206ENST00000597811 USP17L2Q6R6M4 530 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 STK11IPQ8N1F8 1099 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 DIAPH3Q9NSV4 1193 aa18.44■□□□□ 0.54
XRCC1-206ENST00000597811 ARPP21Q9UBL0 812 aaPredicted RBP18.44■□□□□ 0.54
XRCC1-206ENST00000597811 GSG1L2A8MUP6 293 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 PATL2C9JE40 543 aaKnown RBP18.43■□□□□ 0.54
XRCC1-206ENST00000597811 PEX10O60683 326 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 CTR9Q6PD62 1173 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 ACER1Q8TDN7 264 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 P2RX7Q99572 595 aaKnown RBP18.43■□□□□ 0.54
XRCC1-206ENST00000597811 FEZ1Q99689 392 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 HELLSQ9NRZ9 838 aa18.43■□□□□ 0.54
XRCC1-206ENST00000597811 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 SDSP20132 328 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 HERVK_113P62684 666 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
XRCC1-206ENST00000597811 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 TTC22Q5TAA0 569 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 C12orf60Q5U649 245 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 SLAIN1Q8ND83 568 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 COA7Q96BR5 231 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 C12orf42Q96LP6 360 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 NAPBQ9H115 298 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 TXNRD2Q9NNW7 524 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 SWAP70Q9UH65 585 aa18.42■□□□□ 0.54
XRCC1-206ENST00000597811 RLFQ13129 1914 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 HIP1O00291 1037 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 ADCY3O60266 1144 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 ELNP15502 786 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 IRF5Q13568 498 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 SEPT2Q15019 361 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 GIMAP6Q6P9H5 292 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 IFNL3Q8IZI9 196 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
XRCC1-206ENST00000597811 BIN2Q9UBW5 565 aaPredicted RBP18.41■□□□□ 0.54
XRCC1-206ENST00000597811 PARP14Q460N5 1801 aa18.4■□□□□ 0.54
XRCC1-206ENST00000597811 A0A0D9SFI3 127 aa18.4■□□□□ 0.54
XRCC1-206ENST00000597811 CCL5P13501 91 aa18.4■□□□□ 0.54
XRCC1-206ENST00000597811 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
XRCC1-206ENST00000597811 PRPF38BQ5VTL8 546 aaKnown RBP18.4■□□□□ 0.54
XRCC1-206ENST00000597811 POTEEQ6S8J3 1075 aa18.4■□□□□ 0.54
XRCC1-206ENST00000597811 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
XRCC1-206ENST00000597811 SHISA4Q96DD7 197 aa18.4■□□□□ 0.54
XRCC1-206ENST00000597811 GREB1LQ9C091 1923 aaPredicted RBP18.39■□□□□ 0.53
XRCC1-206ENST00000597811 VCAM1P19320 739 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 CDK8P49336 464 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 USP14P54578 494 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 UBXN2AP68543 259 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 PXYLP1Q8TE99 480 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 MKNK2Q9HBH9 465 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 EPB41L4AQ9HCS5 686 aaPredicted RBP18.39■□□□□ 0.53
XRCC1-206ENST00000597811 RBPJLQ9UBG7 517 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
XRCC1-206ENST00000597811 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
XRCC1-206ENST00000597811 INHAP05111 366 aa18.38■□□□□ 0.53
XRCC1-206ENST00000597811 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms