RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 C12orf42Q96LP6 360 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 FAM227BQ96M60 508 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 KIAA1683Q9H0B3 1180 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 MGAMO43451 1857 aa25.21■■□□□ 1.63
PNKP-209ENST00000596726 MINDY4BA8MYZ0 360 aa25.21■■□□□ 1.63
PNKP-209ENST00000596726 MPHOSPH10O00566 681 aaKnown RBP25.21■■□□□ 1.63
PNKP-209ENST00000596726 ARHGEF6Q15052 776 aa25.21■■□□□ 1.63
PNKP-209ENST00000596726 NACAP1Q9BZK3 213 aa25.21■■□□□ 1.63
PNKP-209ENST00000596726 ASCC2Q9H1I8 757 aaPredicted RBP25.21■■□□□ 1.63
PNKP-209ENST00000596726 HTTP42858 3142 aa25.21■■□□□ 1.63
PNKP-209ENST00000596726 GREB1LQ9C091 1923 aaPredicted RBP25.2■■□□□ 1.62
PNKP-209ENST00000596726 A0A0D9SFI3 127 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 CAPN15O75808 1086 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 OSBPP22059 807 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 MCMDC2Q4G0Z9 681 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 ARHGAP39Q9C0H5 1083 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 HPS5Q9UPZ3 1129 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 PTPN22Q9Y2R2 807 aa25.2■■□□□ 1.62
PNKP-209ENST00000596726 SDSP20132 328 aa25.19■■□□□ 1.62
PNKP-209ENST00000596726 CTGFP29279 349 aa25.19■■□□□ 1.62
PNKP-209ENST00000596726 USP14P54578 494 aa25.19■■□□□ 1.62
PNKP-209ENST00000596726 NMIQ13287 307 aaPredicted RBP25.19■■□□□ 1.62
PNKP-209ENST00000596726 KIF22Q14807 665 aa25.19■■□□□ 1.62
PNKP-209ENST00000596726 SIAH1Q8IUQ4 282 aa25.19■■□□□ 1.62
PNKP-209ENST00000596726 SMCR8Q8TEV9 937 aaPredicted RBP25.19■■□□□ 1.62
PNKP-209ENST00000596726 A0A1W2PRG0 241 aa25.18■■□□□ 1.62
PNKP-209ENST00000596726 RASA1P20936 1047 aa25.18■■□□□ 1.62
PNKP-209ENST00000596726 FEZ1Q99689 392 aa25.18■■□□□ 1.62
PNKP-209ENST00000596726 NAPBQ9H115 298 aa25.18■■□□□ 1.62
PNKP-209ENST00000596726 GNRH1P01148 92 aa25.17■■□□□ 1.62
PNKP-209ENST00000596726 ZYXQ15942 572 aaKnown RBP25.17■■□□□ 1.62
PNKP-209ENST00000596726 VPS53Q5VIR6 699 aa25.17■■□□□ 1.62
PNKP-209ENST00000596726 CCDC85CA6NKD9 419 aa25.16■■□□□ 1.62
PNKP-209ENST00000596726 PSMC4P43686 418 aa25.16■■□□□ 1.62
PNKP-209ENST00000596726 GCLCP48506 637 aaPredicted RBP25.16■■□□□ 1.62
PNKP-209ENST00000596726 ALX1Q15699 326 aa25.16■■□□□ 1.62
PNKP-209ENST00000596726 TRIM47Q96LD4 638 aa25.16■■□□□ 1.62
PNKP-209ENST00000596726 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.16■■□□□ 1.62
PNKP-209ENST00000596726 IRX3P78415 501 aaPredicted RBP25.15■■□□□ 1.62
PNKP-209ENST00000596726 FAM110CQ1W6H9 321 aa25.15■■□□□ 1.62
PNKP-209ENST00000596726 TTC22Q5TAA0 569 aa25.15■■□□□ 1.62
PNKP-209ENST00000596726 ZNF589Q86UQ0 364 aaPredicted RBP25.15■■□□□ 1.62
PNKP-209ENST00000596726 CLEC10AQ8IUN9 316 aa25.15■■□□□ 1.62
PNKP-209ENST00000596726 STK11IPQ8N1F8 1099 aa25.15■■□□□ 1.62
PNKP-209ENST00000596726 ANKRD13CQ8N6S4 541 aa25.15■■□□□ 1.62
PNKP-209ENST00000596726 P2RX7Q99572 595 aaKnown RBP25.15■■□□□ 1.62
PNKP-209ENST00000596726 MKNK2Q9HBH9 465 aa25.15■■□□□ 1.62
PNKP-209ENST00000596726 DOCK3Q8IZD9 2030 aa25.14■■□□□ 1.62
PNKP-209ENST00000596726 GSPT1P15170 499 aaKnown RBP25.14■■□□□ 1.62
PNKP-209ENST00000596726 ICA1Q05084 483 aa25.14■■□□□ 1.62
PNKP-209ENST00000596726 PPARAQ07869 468 aa25.14■■□□□ 1.62
PNKP-209ENST00000596726 KANSL2Q9H9L4 492 aa25.14■■□□□ 1.62
PNKP-209ENST00000596726 TMX2Q9Y320 296 aa25.14■■□□□ 1.62
PNKP-209ENST00000596726 USP17L15C9J2P7 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L13C9JLJ4 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L11C9JVI0 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L18D6R9N7 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L22D6RA61 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L17D6RBQ6 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L19D6RCP7 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L20D6RJB6 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 VCAM1P19320 739 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 HERVK_113P62684 666 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 USP17L24Q0WX57 530 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 CATSPERGQ6ZRH7 1159 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 ZNF287Q9HBT7 754 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 ARHGEF10LQ9HCE6 1279 aa25.13■■□□□ 1.61
PNKP-209ENST00000596726 CCDC171Q6TFL3 1326 aa25.12■■□□□ 1.61
PNKP-209ENST00000596726 HIP1O00291 1037 aa25.12■■□□□ 1.61
PNKP-209ENST00000596726 HSPD1P10809 573 aaKnown RBP25.12■■□□□ 1.61
PNKP-209ENST00000596726 PRMT2P55345 433 aa25.12■■□□□ 1.61
PNKP-209ENST00000596726 MORF4L1Q9UBU8 362 aa25.12■■□□□ 1.61
PNKP-209ENST00000596726 ANAPC4Q9UJX5 808 aa25.12■■□□□ 1.61
PNKP-209ENST00000596726 ECM2O94769 699 aaPredicted RBP25.11■■□□□ 1.61
PNKP-209ENST00000596726 FMNL1O95466 1100 aaPredicted RBP25.11■■□□□ 1.61
PNKP-209ENST00000596726 FGAP02671 866 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 EEF2P13639 858 aaKnown RBP25.11■■□□□ 1.61
PNKP-209ENST00000596726 FCGRTP55899 365 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 PDE4BQ07343 736 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 KIAA1755Q5JYT7 1200 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 POTEEQ6S8J3 1075 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 ZNF444Q8N0Y2 327 aaPredicted RBP25.11■■□□□ 1.61
PNKP-209ENST00000596726 SRRDQ9UH36 339 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 PTCH2Q9Y6C5 1203 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 ZMYM6O95789 1325 aa25.11■■□□□ 1.61
PNKP-209ENST00000596726 RLFQ13129 1914 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 IGKV6D-41A0A0C4DH26 115 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 PRDM1O75626 825 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 SLC3A2P08195 630 aaKnown RBP25.1■■□□□ 1.61
PNKP-209ENST00000596726 HOXD10P28358 340 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 MFAP1P55081 439 aaKnown RBP25.1■■□□□ 1.61
PNKP-209ENST00000596726 RPAP3Q9H6T3 665 aaPredicted RBP25.1■■□□□ 1.61
PNKP-209ENST00000596726 SH2D4AQ9H788 454 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 VCPKMTQ9H867 229 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 DIAPH3Q9NSV4 1193 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 CENPFP49454 3210 aa25.1■■□□□ 1.61
PNKP-209ENST00000596726 CWC27Q6UX04 472 aaKnown RBP25.09■■□□□ 1.61
PNKP-209ENST00000596726 GTF3C2Q8WUA4 911 aaPredicted RBP25.09■■□□□ 1.61
PNKP-209ENST00000596726 LPAR1Q92633 364 aa25.09■■□□□ 1.61
PNKP-209ENST00000596726 TXNRD2Q9NNW7 524 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms