RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SKAP1Q86WV1 359 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 ADAMTS19Q8TE59 1207 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 RNPC3Q96LT9 517 aaKnown RBP15.65■□□□□ 0.1
SCAF1-202ENST00000595242 ASB2Q96Q27 587 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 PDLIM7Q9NR12 457 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 REV3LO60673 3130 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 TRIM43BA6NCK2 446 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 C19orf81C9J6K1 198 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 GLRX3O76003 335 aaKnown RBP15.64■□□□□ 0.09
SCAF1-202ENST00000595242 RFX5P48382 616 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-202ENST00000595242 ATP2B2Q01814 1243 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 POTEEQ6S8J3 1075 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 ARRDC4Q8NCT1 418 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 GTF3C2Q8WUA4 911 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-202ENST00000595242 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
SCAF1-202ENST00000595242 TRIM43Q96BQ3 446 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-202ENST00000595242 KBTBD13C9JR72 458 aa15.63■□□□□ 0.09
SCAF1-202ENST00000595242 SNX17Q15036 470 aa15.63■□□□□ 0.09
SCAF1-202ENST00000595242 SPTY2D1Q68D10 685 aaPredicted RBP15.63■□□□□ 0.09
SCAF1-202ENST00000595242 TRPV1Q8NER1 839 aa15.63■□□□□ 0.09
SCAF1-202ENST00000595242 ZNF576Q9H609 170 aa15.63■□□□□ 0.09
SCAF1-202ENST00000595242 HERC5Q9UII4 1024 aaKnown RBP15.63■□□□□ 0.09
SCAF1-202ENST00000595242 FOCADQ5VW36 1801 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 USP17L10C9JJH3 530 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 ASNSP08243 561 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 DNAJB2P25686 324 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 CYP2C19P33261 490 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 MECOMQ03112 1051 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 C8orf34Q49A92 452 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 WDR78Q5VTH9 848 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 CCDC102BQ68D86 513 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 UHRF1Q96T88 793 aaPredicted RBP15.62■□□□□ 0.09
SCAF1-202ENST00000595242 CEP126Q9P2H0 1117 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 THEGQ9P2T0 379 aa15.62■□□□□ 0.09
SCAF1-202ENST00000595242 GBF1Q92538 1859 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.61■□□□□ 0.09
SCAF1-202ENST00000595242 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.61■□□□□ 0.09
SCAF1-202ENST00000595242 SLC15A5A6NIM6 579 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 ZBTB22O15209 634 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
SCAF1-202ENST00000595242 PTPREP23469 700 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 ITGB8P26012 769 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 EPHB4P54760 987 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 CCNA1P78396 465 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 JAG1P78504 1218 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 RASGRF1Q13972 1273 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 USP44Q9H0E7 712 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 SIL1Q9H173 461 aa15.61■□□□□ 0.09
SCAF1-202ENST00000595242 XIRP2A4UGR9 3374 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 HOXC6P09630 235 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 CYBAP13498 195 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 ADORA1P30542 326 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 ADCYAP1R1P41586 468 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 MRPS5P82675 430 aaKnown RBP15.6■□□□□ 0.09
SCAF1-202ENST00000595242 C1orf53Q5VUE5 145 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 ANO1Q5XXA6 986 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 ERICH6Q7L0X2 663 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 NPLOC4Q8TAT6 608 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 ZNF384Q8TF68 577 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 FERMT2Q96AC1 680 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 GAS2L1Q99501 681 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-202ENST00000595242 PI4KBQ9UBF8 816 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 RABGAP1Q9Y3P9 1069 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 CHD9Q3L8U1 2897 aa15.6■□□□□ 0.09
SCAF1-202ENST00000595242 CNMDO75829 334 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 CIAO1O76071 339 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 MAP4K4O95819 1239 aaPredicted RBP15.59■□□□□ 0.09
SCAF1-202ENST00000595242 TLE2Q04725 743 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 IL27Q8NEV9 243 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 TIFAQ96CG3 184 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 C1QTNF1Q9BXJ1 281 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 IVNS1ABPQ9Y6Y0 642 aa15.59■□□□□ 0.09
SCAF1-202ENST00000595242 PDS5AQ29RF7 1337 aaKnown RBP15.59■□□□□ 0.09
SCAF1-202ENST00000595242 GRB14Q14449 540 aa15.58■□□□□ 0.08
SCAF1-202ENST00000595242 SHROOM1Q2M3G4 852 aaPredicted RBP15.58■□□□□ 0.08
SCAF1-202ENST00000595242 AKNAD1Q5T1N1 836 aa15.58■□□□□ 0.08
SCAF1-202ENST00000595242 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
SCAF1-202ENST00000595242 MYH1P12882 1939 aa15.58■□□□□ 0.08
SCAF1-202ENST00000595242 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 GDF11O95390 407 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 IGHA2P01877 340 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 LDHCP07864 332 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 CLTBP09497 229 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 RAG1P15918 1043 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 FPGSQ05932 587 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 USP17L2Q6R6M4 530 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 SYNGAP1Q96PV0 1343 aa15.57■□□□□ 0.08
SCAF1-202ENST00000595242 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
SCAF1-202ENST00000595242 SEPT4O43236 478 aa15.56■□□□□ 0.08
SCAF1-202ENST00000595242 ANP32AP39687 249 aaKnown RBP15.56■□□□□ 0.08
SCAF1-202ENST00000595242 TIMM10P62072 90 aa15.56■□□□□ 0.08
SCAF1-202ENST00000595242 GSTO1P78417 241 aa15.56■□□□□ 0.08
SCAF1-202ENST00000595242 NUCB1Q02818 461 aa15.56■□□□□ 0.08
SCAF1-202ENST00000595242 CCDC85BQ15834 202 aaPredicted RBP15.56■□□□□ 0.08
SCAF1-202ENST00000595242 DPP9Q86TI2 863 aa15.56■□□□□ 0.08
SCAF1-202ENST00000595242 TEX11Q8IYF3 940 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms