RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 ZYXQ15942 572 aaKnown RBP19.25■□□□□ 0.67
IRF3-210ENST00000595240 LRRFIP1Q32MZ4 808 aaKnown RBP19.25■□□□□ 0.67
IRF3-210ENST00000595240 CTR9Q6PD62 1173 aa19.25■□□□□ 0.67
IRF3-210ENST00000595240 TMEM179Q6ZVK1 233 aa19.25■□□□□ 0.67
IRF3-210ENST00000595240 AMOTL1Q8IY63 956 aa19.25■□□□□ 0.67
IRF3-210ENST00000595240 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
IRF3-210ENST00000595240 BRCA2P51587 3418 aa19.25■□□□□ 0.67
IRF3-210ENST00000595240 GSG1L2A8MUP6 293 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 MPHOSPH10O00566 681 aaKnown RBP19.24■□□□□ 0.67
IRF3-210ENST00000595240 FLT3LGP49771 235 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 GIMAP6Q6P9H5 292 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 C16orf86Q6ZW13 317 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 TMEM106CQ9BVX2 250 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 TXNRD2Q9NNW7 524 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 ARPP21Q9UBL0 812 aaPredicted RBP19.24■□□□□ 0.67
IRF3-210ENST00000595240 STAP2Q9UGK3 403 aa19.24■□□□□ 0.67
IRF3-210ENST00000595240 KIAA0100Q14667 2235 aaKnown RBP19.24■□□□□ 0.67
IRF3-210ENST00000595240 A0A1W2PRG0 241 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 GPAA1O43292 621 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 AKR1B1P15121 316 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 VCAM1P19320 739 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 EN2P19622 333 aaPredicted RBP19.23■□□□□ 0.67
IRF3-210ENST00000595240 CDK8P49336 464 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 IRF5Q13568 498 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 SBK1Q52WX2 424 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 POTEEQ6S8J3 1075 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 SLAIN1Q8ND83 568 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 GTF3C2Q8WUA4 911 aaPredicted RBP19.23■□□□□ 0.67
IRF3-210ENST00000595240 COA7Q96BR5 231 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 CCDC17Q96LX7 622 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
IRF3-210ENST00000595240 TNRC18O15417 2968 aaPredicted RBP19.23■□□□□ 0.67
IRF3-210ENST00000595240 USP17L15C9J2P7 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L13C9JLJ4 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L11C9JVI0 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L18D6R9N7 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L22D6RA61 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L17D6RBQ6 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L19D6RCP7 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L20D6RJB6 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 M0R2C6 588 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 MYCP01106 439 aaPredicted RBP19.22■□□□□ 0.67
IRF3-210ENST00000595240 GNAT2P19087 354 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 USP17L24Q0WX57 530 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 SMC5Q8IY18 1101 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 GPRC5AQ8NFJ5 357 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 EXOC6Q8TAG9 804 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 FSD1Q9BTV5 496 aa19.22■□□□□ 0.67
IRF3-210ENST00000595240 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
IRF3-210ENST00000595240 MGAMO43451 1857 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 ADCY3O60266 1144 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 PEX10O60683 326 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 PDE1AP54750 535 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 CATSPERGQ6ZRH7 1159 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 SIAH1Q8IUQ4 282 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 PXYLP1Q8TE99 480 aa19.21■□□□□ 0.67
IRF3-210ENST00000595240 RWDD1Q9H446 243 aaPredicted RBP19.21■□□□□ 0.67
IRF3-210ENST00000595240 EPB41L4AQ9HCS5 686 aaPredicted RBP19.21■□□□□ 0.67
IRF3-210ENST00000595240 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
IRF3-210ENST00000595240 MTFR1Q15390 333 aa19.2■□□□□ 0.66
IRF3-210ENST00000595240 ZMYM1Q5SVZ6 1142 aa19.2■□□□□ 0.66
IRF3-210ENST00000595240 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
IRF3-210ENST00000595240 GJD2Q9UKL4 321 aa19.2■□□□□ 0.66
IRF3-210ENST00000595240 MKI67P46013 3256 aaKnown RBP19.2■□□□□ 0.66
IRF3-210ENST00000595240 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 IGHDP01880 384 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 ELNP15502 786 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 ERVK-9P63128 1117 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 ERVK-24P63145 666 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 ICA1Q05084 483 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 CLEC10AQ8IUN9 316 aa19.19■□□□□ 0.66
IRF3-210ENST00000595240 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
IRF3-210ENST00000595240 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
IRF3-210ENST00000595240 PATL2C9JE40 543 aaKnown RBP19.18■□□□□ 0.66
IRF3-210ENST00000595240 UBXN2AP68543 259 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 Q3C1V9 767 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 LBX2Q6XYB7 198 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 EVI5LQ96CN4 794 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 ARHGEF10LQ9HCE6 1279 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 BIN2Q9UBW5 565 aaPredicted RBP19.18■□□□□ 0.66
IRF3-210ENST00000595240 TMX2Q9Y320 296 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 RABGAP1Q9Y3P9 1069 aa19.18■□□□□ 0.66
IRF3-210ENST00000595240 MINDY4BA8MYZ0 360 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 CNMDO75829 334 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 APPP05067 770 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 CCL5P13501 91 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 MAPK4P31152 587 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 TDO2P48775 406 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 LPAR1Q92633 364 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 PAGR1Q9BTK6 254 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.17■□□□□ 0.66
IRF3-210ENST00000595240 KANSL2Q9H9L4 492 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
IRF3-210ENST00000595240 SPDYE16A6NNV3 312 aaPredicted RBP19.16■□□□□ 0.66
IRF3-210ENST00000595240 INHAP05111 366 aa19.16■□□□□ 0.66
IRF3-210ENST00000595240 RASA1P20936 1047 aa19.16■□□□□ 0.66
IRF3-210ENST00000595240 IFNL3Q8IZI9 196 aa19.16■□□□□ 0.66
IRF3-210ENST00000595240 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms