RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 GPATCH3Q96I76 525 aa7.06□□□□□ -1.28
SSX4B-201ENST00000595235 ASCC2Q9H1I8 757 aaPredicted RBP7.06□□□□□ -1.28
SSX4B-201ENST00000595235 EMILIN3Q9NT22 766 aa7.06□□□□□ -1.28
SSX4B-201ENST00000595235 GINM1Q9NU53 330 aa7.06□□□□□ -1.28
SSX4B-201ENST00000595235 TMOD4Q9NZQ9 345 aa7.06□□□□□ -1.28
SSX4B-201ENST00000595235 TTC41PQ6P2S7 1318 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 HTTP42858 3142 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 M0R2C6 588 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 EN2P19622 333 aaPredicted RBP7.05□□□□□ -1.28
SSX4B-201ENST00000595235 MX1P20591 662 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 HOXA7P31268 230 aaPredicted RBP7.05□□□□□ -1.28
SSX4B-201ENST00000595235 IRX3P78415 501 aaPredicted RBP7.05□□□□□ -1.28
SSX4B-201ENST00000595235 HDAC1Q13547 482 aaPredicted RBP7.05□□□□□ -1.28
SSX4B-201ENST00000595235 MTFR1Q15390 333 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 FAM110CQ1W6H9 321 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 ZSCAN25Q6NSZ9 544 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 CTR9Q6PD62 1173 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 USP17L2Q6R6M4 530 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 POTEEQ6S8J3 1075 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 CLEC10AQ8IUN9 316 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 ZNF579Q8NAF0 562 aaKnown RBP7.05□□□□□ -1.28
SSX4B-201ENST00000595235 RAET1EQ8TD07 263 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 APPBP2Q92624 585 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 C12orf42Q96LP6 360 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 STRBPQ96SI9 672 aaKnown RBP7.05□□□□□ -1.28
SSX4B-201ENST00000595235 FEZ1Q99689 392 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 TXNRD2Q9NNW7 524 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 ATP8A2Q9NTI2 1148 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 SLC4A4Q9Y6R1 1079 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 RLFQ13129 1914 aa7.05□□□□□ -1.28
SSX4B-201ENST00000595235 A0A1W2PRG0 241 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 USP17L21D6R901 530 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 MPHOSPH10O00566 681 aaKnown RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 TNPO2O14787 897 aaKnown RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 RNF113AO15541 343 aaKnown RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 GABBR2O75899 941 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 GLRX3O76003 335 aaKnown RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 AKR1B1P15121 316 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 VCAM1P19320 739 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 HOXD10P28358 340 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 GRK4P32298 578 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 GCLCP48506 637 aaPredicted RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 FLT3LGP49771 235 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 HERVK_113P62684 666 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 PABPC4Q13310 644 aaKnown RBP eCLIP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 ANKRD45Q5TZF3 282 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 C12orf60Q5U649 245 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 C16orf86Q6ZW13 317 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 SEC62Q99442 399 aaKnown RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 P2RX7Q99572 595 aaKnown RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 KIAA1683Q9H0B3 1180 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 TSPYL2Q9H2G4 693 aaPredicted RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 EPB41L4AQ9HCS5 686 aaPredicted RBP7.04□□□□□ -1.28
SSX4B-201ENST00000595235 CABP5Q9NP86 173 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 MORF4L1Q9UBU8 362 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 DOCK3Q8IZD9 2030 aa7.04□□□□□ -1.28
SSX4B-201ENST00000595235 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 ERC2O15083 957 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 GPAA1O43292 621 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 CNMDO75829 334 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 IGHDP01880 384 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 ZFYP08048 801 aaPredicted RBP7.03□□□□□ -1.28
SSX4B-201ENST00000595235 ELNP15502 786 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 CDK8P49336 464 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 VASPP50552 380 aaPredicted RBP7.03□□□□□ -1.28
SSX4B-201ENST00000595235 USP14P54578 494 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 IRF5Q13568 498 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 Q3C1V9 767 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 KIAA1755Q5JYT7 1200 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 TMEM179Q6ZVK1 233 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 NBPF11Q86T75 865 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 SIAH1Q8IUQ4 282 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 STK11IPQ8N1F8 1099 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 GCC1Q96CN9 775 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 SHISA4Q96DD7 197 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 FSD1Q9BTV5 496 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 RBPJLQ9UBG7 517 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 ARPP21Q9UBL0 812 aaPredicted RBP7.03□□□□□ -1.28
SSX4B-201ENST00000595235 SWAP70Q9UH65 585 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 SUPT16HQ9Y5B9 1047 aaKnown RBP7.03□□□□□ -1.28
SSX4B-201ENST00000595235 ROBO3Q96MS0 1386 aa7.03□□□□□ -1.28
SSX4B-201ENST00000595235 COL11A1P12107 1806 aaPredicted RBP7.03□□□□□ -1.28
SSX4B-201ENST00000595235 FRMPD3Q5JV73 1810 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 MYH4Q9Y623 1939 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 SPDYE16A6NNV3 312 aaPredicted RBP7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L15C9J2P7 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L13C9JLJ4 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L11C9JVI0 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L18D6R9N7 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L22D6RA61 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L17D6RBQ6 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L19D6RCP7 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L20D6RJB6 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 FOXP2O15409 715 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 ADCY3O60266 1144 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 INHAP05111 366 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 PDE1AP54750 535 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 ERVK-9P63128 1117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms