RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RREB1Q92766 1687 aa15.06■□□□□ 0
VRK3-209ENST00000594948 TRIM75PA6NK02 468 aa15.06■□□□□ 0
VRK3-209ENST00000594948 UBE2Q2LH0YL09 131 aa15.06■□□□□ 0
VRK3-209ENST00000594948 CHMP4BP1P59074 171 aa15.06■□□□□ 0
VRK3-209ENST00000594948 SLC20A2Q08357 652 aa15.06■□□□□ 0
VRK3-209ENST00000594948 PTPN21Q16825 1174 aa15.06■□□□□ 0
VRK3-209ENST00000594948 ZNF827Q17R98 1081 aa15.06■□□□□ 0
VRK3-209ENST00000594948 LONRF2Q1L5Z9 754 aa15.06■□□□□ 0
VRK3-209ENST00000594948 RAD9BQ6WBX8 426 aa15.06■□□□□ 0
VRK3-209ENST00000594948 ZNF654Q8IZM8 581 aa15.06■□□□□ 0
VRK3-209ENST00000594948 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
VRK3-209ENST00000594948 FANCBQ8NB91 859 aa15.06■□□□□ 0
VRK3-209ENST00000594948 PYM1Q9BRP8 204 aaKnown RBP15.06■□□□□ 0
VRK3-209ENST00000594948 PRDM11Q9NQV5 511 aa15.06■□□□□ 0
VRK3-209ENST00000594948 HNRNPH2P55795 449 aaKnown RBP15.05■□□□□ -0
VRK3-209ENST00000594948 DPYDQ12882 1025 aa15.05■□□□□ -0
VRK3-209ENST00000594948 TRIM14Q14142 442 aa15.05■□□□□ -0
VRK3-209ENST00000594948 KARSQ15046 597 aaKnown RBP15.05■□□□□ -0
VRK3-209ENST00000594948 DESI2Q9BSY9 194 aa15.05■□□□□ -0
VRK3-209ENST00000594948 IQSEC3Q9UPP2 1182 aaPredicted RBP15.05■□□□□ -0
VRK3-209ENST00000594948 PHLPP1O60346 1717 aa15.05■□□□□ -0
VRK3-209ENST00000594948 DISP2A7MBM2 1401 aa15.05■□□□□ -0
VRK3-209ENST00000594948 A0A1B0GUL6 1792 aa15.05■□□□□ -0
VRK3-209ENST00000594948 ERVV-1B6SEH8 477 aa15.04■□□□□ -0
VRK3-209ENST00000594948 POLR3GO15318 223 aaPredicted RBP15.04■□□□□ -0
VRK3-209ENST00000594948 ERLIN1O75477 346 aa15.04■□□□□ -0
VRK3-209ENST00000594948 SPAG1Q07617 926 aa15.04■□□□□ -0
VRK3-209ENST00000594948 RBL2Q08999 1139 aa15.04■□□□□ -0
VRK3-209ENST00000594948 NR5A1Q13285 461 aa15.04■□□□□ -0
VRK3-209ENST00000594948 HLFQ16534 295 aa15.04■□□□□ -0
VRK3-209ENST00000594948 HSP90AA4PQ58FG1 418 aa15.04■□□□□ -0
VRK3-209ENST00000594948 GRAMD1CQ8IYS0 662 aa15.04■□□□□ -0
VRK3-209ENST00000594948 PAGE5Q96GU1 130 aa15.04■□□□□ -0
VRK3-209ENST00000594948 ARMT1Q9H993 441 aa15.04■□□□□ -0
VRK3-209ENST00000594948 INCENPQ9NQS7 918 aa15.04■□□□□ -0
VRK3-209ENST00000594948 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
VRK3-209ENST00000594948 ANAPC4Q9UJX5 808 aa15.04■□□□□ -0
VRK3-209ENST00000594948 DUOX1Q9NRD9 1551 aa15.04■□□□□ -0
VRK3-209ENST00000594948 SOWAHDA6NJG2 315 aa15.03■□□□□ -0
VRK3-209ENST00000594948 TEX33O43247 280 aa15.03■□□□□ -0
VRK3-209ENST00000594948 KRT2P35908 639 aa15.03■□□□□ -0
VRK3-209ENST00000594948 TDO2P48775 406 aa15.03■□□□□ -0
VRK3-209ENST00000594948 MTF1Q14872 753 aa15.03■□□□□ -0
VRK3-209ENST00000594948 SEC23AQ15436 765 aa15.03■□□□□ -0
VRK3-209ENST00000594948 TMTC1Q8IUR5 882 aa15.03■□□□□ -0
VRK3-209ENST00000594948 SYNE4Q8N205 404 aa15.03■□□□□ -0
VRK3-209ENST00000594948 PHF20Q9BVI0 1012 aa15.03■□□□□ -0
VRK3-209ENST00000594948 GBP3Q9H0R5 595 aa15.03■□□□□ -0
VRK3-209ENST00000594948 EPC1Q9H2F5 836 aa15.03■□□□□ -0
VRK3-209ENST00000594948 SEC31BQ9NQW1 1179 aa15.03■□□□□ -0
VRK3-209ENST00000594948 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
VRK3-209ENST00000594948 LRRC10BA6NIK2 292 aa15.03■□□□□ -0
VRK3-209ENST00000594948 PPP1R3GB7ZBB8 358 aa15.03■□□□□ -0
VRK3-209ENST00000594948 PRPF3O43395 683 aaKnown RBP15.03■□□□□ -0
VRK3-209ENST00000594948 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
VRK3-209ENST00000594948 RASGRF1Q13972 1273 aa15.03■□□□□ -0
VRK3-209ENST00000594948 WHAMMP3Q1A5X7 153 aa15.03■□□□□ -0
VRK3-209ENST00000594948 HDXQ7Z353 690 aa15.03■□□□□ -0
VRK3-209ENST00000594948 ANKZF1Q9H8Y5 726 aa15.03■□□□□ -0
VRK3-209ENST00000594948 CABP5Q9NP86 173 aa15.03■□□□□ -0
VRK3-209ENST00000594948 TRMT112Q9UI30 125 aaKnown RBP15.03■□□□□ -0
VRK3-209ENST00000594948 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
VRK3-209ENST00000594948 CTAGE9A4FU28 777 aa15.02■□□□□ -0
VRK3-209ENST00000594948 EIF3JO75822 258 aaKnown RBP15.02■□□□□ -0
VRK3-209ENST00000594948 CD44P16070 742 aaKnown RBP15.02■□□□□ -0
VRK3-209ENST00000594948 GPTP24298 496 aa15.02■□□□□ -0
VRK3-209ENST00000594948 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
VRK3-209ENST00000594948 BEND6Q5SZJ8 279 aaPredicted RBP15.02■□□□□ -0
VRK3-209ENST00000594948 USP49Q70CQ1 688 aa15.02■□□□□ -0
VRK3-209ENST00000594948 IQUBQ8NA54 791 aa15.02■□□□□ -0
VRK3-209ENST00000594948 OXER1Q8TDS5 423 aa15.02■□□□□ -0
VRK3-209ENST00000594948 UBAC1Q9BSL1 405 aa15.02■□□□□ -0
VRK3-209ENST00000594948 RBM28Q9NW13 759 aaKnown RBP15.02■□□□□ -0
VRK3-209ENST00000594948 LAMB1P07942 1786 aa15.02□□□□□ -0.01
VRK3-209ENST00000594948 LCORLQ8N3X6 602 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 A0A087X0B3 334 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 GYPCP04921 128 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 CALM1P0DP23 149 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 CALM2P0DP24 149 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 CALM3P0DP25 149 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 PCP11498 1178 aaKnown RBP15.01□□□□□ -0.01
VRK3-209ENST00000594948 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 ST5P78524 1137 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 PPARAQ07869 468 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 PKN1Q16512 942 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 RRP12Q5JTH9 1297 aaKnown RBP15.01□□□□□ -0.01
VRK3-209ENST00000594948 ZNF569Q5MCW4 686 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 ZNF34Q8IZ26 560 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 GOLGA5Q8TBA6 731 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 PIGBQ92521 554 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 ESR2Q92731 530 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 NAPGQ99747 312 aaPredicted RBP15.01□□□□□ -0.01
VRK3-209ENST00000594948 BRMS1Q9HCU9 246 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 LZTFL1Q9NQ48 299 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 CWC15Q9P013 229 aaKnown RBP15.01□□□□□ -0.01
VRK3-209ENST00000594948 RWDD2AQ9UIY3 292 aa15.01□□□□□ -0.01
VRK3-209ENST00000594948 CYP19A1P11511 503 aaPredicted RBP15□□□□□ -0.01
VRK3-209ENST00000594948 FUT2Q10981 343 aa15□□□□□ -0.01
VRK3-209ENST00000594948 CYP26C1Q6V0L0 522 aa15□□□□□ -0.01
VRK3-209ENST00000594948 NEK11Q8NG66 645 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms