RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 PEX10O60683 326 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 APPP05067 770 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 AKR1B1P15121 316 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 HOXD10P28358 340 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 FCGRTP55899 365 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 NUCB1Q02818 461 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 ZMYM1Q5SVZ6 1142 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 C16orf86Q6ZW13 317 aa17.69■□□□□ 0.42
USE1-205ENST00000594724 EPB41L4AQ9HCS5 686 aaPredicted RBP17.69■□□□□ 0.42
USE1-205ENST00000594724 A0A1W2PRG0 241 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 MINDY4BA8MYZ0 360 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
USE1-205ENST00000594724 GCLCP48506 637 aaPredicted RBP17.68■□□□□ 0.42
USE1-205ENST00000594724 PRMT2P55345 433 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 MLLT1Q03111 559 aaPredicted RBP17.68■□□□□ 0.42
USE1-205ENST00000594724 SLC9C1Q4G0N8 1177 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 CLEC10AQ8IUN9 316 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 KIAA1683Q9H0B3 1180 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 ARPP21Q9UBL0 812 aaPredicted RBP17.68■□□□□ 0.42
USE1-205ENST00000594724 GABRQQ9UN88 632 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
USE1-205ENST00000594724 MYCP01106 439 aaPredicted RBP17.67■□□□□ 0.42
USE1-205ENST00000594724 GNAT2P19087 354 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 USP14P54578 494 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 PRKCZQ05513 592 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 FAM110CQ1W6H9 321 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 CCDC129Q6ZRS4 1044 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 TMEM179Q6ZVK1 233 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 C12orf42Q96LP6 360 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 TAOK2Q9UL54 1235 aa17.67■□□□□ 0.42
USE1-205ENST00000594724 TNPO2O14787 897 aaKnown RBP17.66■□□□□ 0.42
USE1-205ENST00000594724 TDO2P48775 406 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 HERVK_113P62684 666 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 SIAH1Q8IUQ4 282 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 PLEKHM2Q8IWE5 1019 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 IFNL3Q8IZI9 196 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 RAET1EQ8TD07 263 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 CCDC17Q96LX7 622 aa17.66■□□□□ 0.42
USE1-205ENST00000594724 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L15C9J2P7 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L13C9JLJ4 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L11C9JVI0 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L18D6R9N7 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L22D6RA61 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L17D6RBQ6 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L19D6RCP7 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L20D6RJB6 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 VCAM1P19320 739 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 USP17L24Q0WX57 530 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 POTEEQ6S8J3 1075 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 ZNF333Q96JL9 665 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 TXNRD2Q9NNW7 524 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 RBPJLQ9UBG7 517 aa17.65■□□□□ 0.42
USE1-205ENST00000594724 FLT3LGP49771 235 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 ICA1Q05084 483 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 Q3C1V9 767 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 KIAA1755Q5JYT7 1200 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 RPAP3Q9H6T3 665 aaPredicted RBP17.64■□□□□ 0.41
USE1-205ENST00000594724 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 MORF4L1Q9UBU8 362 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 CENPFP49454 3210 aa17.64■□□□□ 0.41
USE1-205ENST00000594724 RASA1P20936 1047 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 GRK4P32298 578 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 ATP2B2Q01814 1243 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 COA7Q96BR5 231 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 FAM227BQ96M60 508 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 NACAP1Q9BZK3 213 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 MGAMO43451 1857 aa17.63■□□□□ 0.41
USE1-205ENST00000594724 PRDM1O75626 825 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 EEF2P13639 858 aaKnown RBP17.62■□□□□ 0.41
USE1-205ENST00000594724 GPRC5AQ8NFJ5 357 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.62■□□□□ 0.41
USE1-205ENST00000594724 TMEM106CQ9BVX2 250 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 NAPBQ9H115 298 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 ARHGEF10LQ9HCE6 1279 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 HELLSQ9NRZ9 838 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 TMX2Q9Y320 296 aa17.62■□□□□ 0.41
USE1-205ENST00000594724 MYH8P13535 1937 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 FOXP2O15409 715 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 MTFR1Q15390 333 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 VPS53Q5VIR6 699 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 SPICE1Q8N0Z3 855 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 KANSL2Q9H9L4 492 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
USE1-205ENST00000594724 ROBO3Q96MS0 1386 aa17.61■□□□□ 0.41
USE1-205ENST00000594724 ADCY3O60266 1144 aa17.6■□□□□ 0.41
USE1-205ENST00000594724 CNMDO75829 334 aa17.6■□□□□ 0.41
USE1-205ENST00000594724 ELNP15502 786 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms