RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NOVP48745 357 aa17.71■□□□□ 0.43
VRK3-207ENST00000594092 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
VRK3-207ENST00000594092 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
VRK3-207ENST00000594092 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
VRK3-207ENST00000594092 CEP95Q96GE4 821 aa17.71■□□□□ 0.43
VRK3-207ENST00000594092 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.43
VRK3-207ENST00000594092 TMEM39BQ9GZU3 492 aa17.71■□□□□ 0.43
VRK3-207ENST00000594092 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
VRK3-207ENST00000594092 IGKV6D-41A0A0C4DH26 115 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 CDKL5O76039 1030 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 CALM1P0DP23 149 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 CALM2P0DP24 149 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 CALM3P0DP25 149 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 TATDN1Q6P1N9 297 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
VRK3-207ENST00000594092 CCDC17Q96LX7 622 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 STX8Q9UNK0 236 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 MTMR6Q9Y217 621 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 ASTN2O75129 1339 aaPredicted RBP17.7■□□□□ 0.42
VRK3-207ENST00000594092 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 DDNO94850 711 aaPredicted RBP17.7■□□□□ 0.42
VRK3-207ENST00000594092 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
VRK3-207ENST00000594092 PTMSP20962 102 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 PNMA1Q8ND90 353 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 TMEM47Q9BQJ4 181 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 PGAP2Q9UHJ9 254 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
VRK3-207ENST00000594092 SOCS7O14512 581 aa17.69■□□□□ 0.42
VRK3-207ENST00000594092 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
VRK3-207ENST00000594092 IFNAR1P17181 557 aa17.69■□□□□ 0.42
VRK3-207ENST00000594092 EPS15P42566 896 aa17.69■□□□□ 0.42
VRK3-207ENST00000594092 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
VRK3-207ENST00000594092 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
VRK3-207ENST00000594092 TRPM4Q8TD43 1214 aa17.69■□□□□ 0.42
VRK3-207ENST00000594092 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
VRK3-207ENST00000594092 ORC3Q9UBD5 711 aaPredicted RBP17.69■□□□□ 0.42
VRK3-207ENST00000594092 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
VRK3-207ENST00000594092 GREB1LQ9C091 1923 aaPredicted RBP17.69■□□□□ 0.42
VRK3-207ENST00000594092 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
VRK3-207ENST00000594092 TNNI2P48788 182 aa17.68■□□□□ 0.42
VRK3-207ENST00000594092 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
VRK3-207ENST00000594092 RASA3Q14644 834 aa17.68■□□□□ 0.42
VRK3-207ENST00000594092 PHKBQ93100 1093 aa17.68■□□□□ 0.42
VRK3-207ENST00000594092 HACL1Q9UJ83 578 aa17.68■□□□□ 0.42
VRK3-207ENST00000594092 SCAF8Q9UPN6 1271 aaKnown RBP17.68■□□□□ 0.42
VRK3-207ENST00000594092 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
VRK3-207ENST00000594092 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
VRK3-207ENST00000594092 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.42
VRK3-207ENST00000594092 RBM28Q9NW13 759 aaKnown RBP17.68■□□□□ 0.42
VRK3-207ENST00000594092 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
VRK3-207ENST00000594092 CLEC10AQ8IUN9 316 aa17.67■□□□□ 0.42
VRK3-207ENST00000594092 MAP3K14Q99558 947 aa17.67■□□□□ 0.42
VRK3-207ENST00000594092 FMNL1O95466 1100 aaPredicted RBP17.66■□□□□ 0.42
VRK3-207ENST00000594092 F13A1P00488 732 aa17.66■□□□□ 0.42
VRK3-207ENST00000594092 SSRP1Q08945 709 aaKnown RBP17.66■□□□□ 0.42
VRK3-207ENST00000594092 SHROOM1Q2M3G4 852 aaPredicted RBP17.66■□□□□ 0.42
VRK3-207ENST00000594092 CDC37L1Q7L3B6 337 aa17.66■□□□□ 0.42
VRK3-207ENST00000594092 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
VRK3-207ENST00000594092 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
VRK3-207ENST00000594092 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
VRK3-207ENST00000594092 STK36Q9NRP7 1315 aa17.66■□□□□ 0.42
VRK3-207ENST00000594092 TBC1D12O60347 775 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 TTLL1O95922 423 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 FOSBP53539 338 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
VRK3-207ENST00000594092 FUT2Q10981 343 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 RRP1BQ14684 758 aaKnown RBP17.65■□□□□ 0.42
VRK3-207ENST00000594092 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 TEPSINQ96N21 525 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 SLC26A6Q9BXS9 759 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 GDF11O95390 407 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 GRM4Q14833 912 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 ABCB5Q2M3G0 1257 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 CLIP2Q9UDT6 1046 aa17.65■□□□□ 0.42
VRK3-207ENST00000594092 H3BQV1 296 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 LMOD1P29536 600 aaPredicted RBP17.64■□□□□ 0.41
VRK3-207ENST00000594092 KIF5BP33176 963 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 IFFO2Q5TF58 517 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 ANGEL2Q5VTE6 544 aaKnown RBP17.64■□□□□ 0.41
VRK3-207ENST00000594092 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 DEFB129Q9H1M3 183 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 ATP6V1DQ9Y5K8 247 aa17.64■□□□□ 0.41
VRK3-207ENST00000594092 UBE2Q2LH0YL09 131 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 JAG1P78504 1218 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 MIGA2Q7L4E1 593 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 APOBEC3FQ8IUX4 373 aaKnown RBP17.63■□□□□ 0.41
VRK3-207ENST00000594092 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 AIFM3Q96NN9 605 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 KANSL2Q9H9L4 492 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 MAD2L2Q9UI95 211 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 MTMR7Q9Y216 660 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms