RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 USP17L11C9JVI0 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L18D6R9N7 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L22D6RA61 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L17D6RBQ6 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L19D6RCP7 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L20D6RJB6 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 RGS2P41220 211 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L24Q0WX57 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 PLEKHH3Q7Z736 793 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 CLASRPQ8N2M8 674 aaKnown RBP27.5■■□□□ 1.99
SSBP4-203ENST00000593641 PORCNQ9H237 461 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 MAGEB6P1A0A0J9YX57 407 aa27.49■■□□□ 1.99
SSBP4-203ENST00000593641 A0A1W2PPC1 479 aa27.49■■□□□ 1.99
SSBP4-203ENST00000593641 POLR3DP05423 398 aaPredicted RBP27.49■■□□□ 1.99
SSBP4-203ENST00000593641 MAP3K21Q5TCX8 1036 aa27.49■■□□□ 1.99
SSBP4-203ENST00000593641 RIOK1Q9BRS2 568 aaKnown RBP27.49■■□□□ 1.99
SSBP4-203ENST00000593641 MYH8P13535 1937 aa27.49■■□□□ 1.99
SSBP4-203ENST00000593641 CCNA1P78396 465 aa27.48■■□□□ 1.99
SSBP4-203ENST00000593641 SLC9C2Q5TAH2 1124 aa27.48■■□□□ 1.99
SSBP4-203ENST00000593641 CRNKL1Q9BZJ0 848 aaKnown RBP27.48■■□□□ 1.99
SSBP4-203ENST00000593641 KIAA1683Q9H0B3 1180 aa27.48■■□□□ 1.99
SSBP4-203ENST00000593641 OGDHLQ9ULD0 1010 aa27.48■■□□□ 1.99
SSBP4-203ENST00000593641 RABGAP1Q9Y3P9 1069 aa27.48■■□□□ 1.99
SSBP4-203ENST00000593641 LAMA3Q16787 3333 aa27.48■■□□□ 1.99
SSBP4-203ENST00000593641 APBB1O00213 710 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 HMMRO75330 724 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 PLCD1P51178 756 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 DIEXFQ68CQ4 756 aaKnown RBP27.47■■□□□ 1.99
SSBP4-203ENST00000593641 C7orf61Q8IZ16 206 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 KIF1BPQ96EK5 621 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 APBA2Q99767 749 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 C11orf49Q9H6J7 331 aa27.47■■□□□ 1.99
SSBP4-203ENST00000593641 GLRX3O76003 335 aaKnown RBP27.46■■□□□ 1.99
SSBP4-203ENST00000593641 IFIT2P09913 472 aaKnown RBP27.46■■□□□ 1.99
SSBP4-203ENST00000593641 PDE6AP16499 860 aa27.46■■□□□ 1.99
SSBP4-203ENST00000593641 VCAM1P19320 739 aa27.46■■□□□ 1.99
SSBP4-203ENST00000593641 SHMT1P34896 483 aa27.46■■□□□ 1.99
SSBP4-203ENST00000593641 CATSPERGQ6ZRH7 1159 aa27.46■■□□□ 1.99
SSBP4-203ENST00000593641 USP6NLQ92738 828 aa27.46■■□□□ 1.99
SSBP4-203ENST00000593641 DNAJC2Q99543 621 aaKnown RBP27.46■■□□□ 1.99
SSBP4-203ENST00000593641 MORN1Q5T089 497 aa27.45■■□□□ 1.98
SSBP4-203ENST00000593641 WDR78Q5VTH9 848 aa27.45■■□□□ 1.98
SSBP4-203ENST00000593641 ACER1Q8TDN7 264 aa27.45■■□□□ 1.98
SSBP4-203ENST00000593641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.45■■□□□ 1.98
SSBP4-203ENST00000593641 STAP2Q9UGK3 403 aa27.45■■□□□ 1.98
SSBP4-203ENST00000593641 CACNB2Q08289 660 aaPredicted RBP27.44■■□□□ 1.98
SSBP4-203ENST00000593641 POTEEQ6S8J3 1075 aa27.44■■□□□ 1.98
SSBP4-203ENST00000593641 RPAP2Q8IXW5 612 aaPredicted RBP27.44■■□□□ 1.98
SSBP4-203ENST00000593641 BCL11AQ9H165 835 aa27.44■■□□□ 1.98
SSBP4-203ENST00000593641 MCM9Q9NXL9 1143 aa27.44■■□□□ 1.98
SSBP4-203ENST00000593641 ZNF532Q9HCE3 1301 aa27.43■■□□□ 1.98
SSBP4-203ENST00000593641 GOLIM4O00461 696 aa27.43■■□□□ 1.98
SSBP4-203ENST00000593641 MNX1P50219 401 aaPredicted RBP27.43■■□□□ 1.98
SSBP4-203ENST00000593641 MAP2K5Q13163 448 aa27.43■■□□□ 1.98
SSBP4-203ENST00000593641 CCL14Q16627 93 aa27.43■■□□□ 1.98
SSBP4-203ENST00000593641 DDX19BQ9UMR2 479 aa27.43■■□□□ 1.98
SSBP4-203ENST00000593641 FRMPD3Q5JV73 1810 aa27.42■■□□□ 1.98
SSBP4-203ENST00000593641 MPHOSPH10O00566 681 aaKnown RBP27.42■■□□□ 1.98
SSBP4-203ENST00000593641 CNMDO75829 334 aa27.42■■□□□ 1.98
SSBP4-203ENST00000593641 RPAP3Q9H6T3 665 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-203ENST00000593641 ZMYND8Q9ULU4 1186 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-203ENST00000593641 IVNS1ABPQ9Y6Y0 642 aa27.42■■□□□ 1.98
SSBP4-203ENST00000593641 GABPAQ06546 454 aa27.41■■□□□ 1.98
SSBP4-203ENST00000593641 SEPT2Q15019 361 aa27.41■■□□□ 1.98
SSBP4-203ENST00000593641 LBX2Q6XYB7 198 aa27.41■■□□□ 1.98
SSBP4-203ENST00000593641 EDC3Q96F86 508 aaKnown RBP27.41■■□□□ 1.98
SSBP4-203ENST00000593641 MYH7P12883 1935 aa27.4■■□□□ 1.98
SSBP4-203ENST00000593641 BAZ2AQ9UIF9 1905 aaKnown RBP27.4■■□□□ 1.98
SSBP4-203ENST00000593641 CCND3P30281 292 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-203ENST00000593641 GUCY1A2P33402 732 aa27.4■■□□□ 1.98
SSBP4-203ENST00000593641 SDR42E1Q8WUS8 393 aa27.4■■□□□ 1.98
SSBP4-203ENST00000593641 SLC15A5A6NIM6 579 aa27.39■■□□□ 1.98
SSBP4-203ENST00000593641 SPDYE16A6NNV3 312 aaPredicted RBP27.39■■□□□ 1.98
SSBP4-203ENST00000593641 RAB11FIP3O75154 756 aa27.39■■□□□ 1.98
SSBP4-203ENST00000593641 MFSD14CQ5VZR4 134 aa27.39■■□□□ 1.98
SSBP4-203ENST00000593641 LCORLQ8N3X6 602 aa27.39■■□□□ 1.98
SSBP4-203ENST00000593641 DCP1AQ9NPI6 582 aaPredicted RBP27.39■■□□□ 1.98
SSBP4-203ENST00000593641 COG6Q9Y2V7 657 aa27.39■■□□□ 1.98
SSBP4-203ENST00000593641 PFASO15067 1338 aa27.39■■□□□ 1.97
SSBP4-203ENST00000593641 TCRBV5S4A2TA0A5A2 114 aa27.38■■□□□ 1.97
SSBP4-203ENST00000593641 PTPREP23469 700 aa27.38■■□□□ 1.97
SSBP4-203ENST00000593641 CHMP4BQ9H444 224 aaKnown RBP27.38■■□□□ 1.97
SSBP4-203ENST00000593641 ZBTB40Q9NUA8 1239 aa27.38■■□□□ 1.97
SSBP4-203ENST00000593641 BTBD7Q9P203 1132 aa27.38■■□□□ 1.97
SSBP4-203ENST00000593641 BMP8BP34820 402 aa27.37■■□□□ 1.97
SSBP4-203ENST00000593641 LHX8Q68G74 356 aa27.37■■□□□ 1.97
SSBP4-203ENST00000593641 GDF15Q99988 308 aa27.37■■□□□ 1.97
SSBP4-203ENST00000593641 PAG1Q9NWQ8 432 aa27.37■■□□□ 1.97
SSBP4-203ENST00000593641 SWAP70Q9UH65 585 aa27.37■■□□□ 1.97
SSBP4-203ENST00000593641 SYN1P17600 705 aa27.36■■□□□ 1.97
SSBP4-203ENST00000593641 EVX2Q03828 476 aa27.36■■□□□ 1.97
SSBP4-203ENST00000593641 GRB14Q14449 540 aa27.36■■□□□ 1.97
SSBP4-203ENST00000593641 TMEM179Q6ZVK1 233 aa27.36■■□□□ 1.97
SSBP4-203ENST00000593641 SIRT2Q8IXJ6 389 aa27.36■■□□□ 1.97
SSBP4-203ENST00000593641 TANGO6Q9C0B7 1094 aa27.36■■□□□ 1.97
SSBP4-203ENST00000593641 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.36■■□□□ 1.976e-8■■■■■ 39.8
SSBP4-203ENST00000593641 ATP2B2Q01814 1243 aa27.35■■□□□ 1.97
SSBP4-203ENST00000593641 COG2Q14746 738 aa27.35■■□□□ 1.97
SSBP4-203ENST00000593641 BOLA2Q9H3K6 86 aa27.35■■□□□ 1.97
SSBP4-203ENST00000593641 ARMT1Q9H993 441 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms