RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
H3F3B-213ENST00000593254 TBC1D2Q9BYX2 928 aa16.03■□□□□ 0.16
H3F3B-213ENST00000593254 UBE2OQ9C0C9 1292 aaKnown RBP16.03■□□□□ 0.16
H3F3B-213ENST00000593254 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
H3F3B-213ENST00000593254 SPP2Q13103 211 aa16.02■□□□□ 0.16
H3F3B-213ENST00000593254 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
H3F3B-213ENST00000593254 ZNF280CQ8ND82 737 aa16.02■□□□□ 0.16
H3F3B-213ENST00000593254 RIOK1Q9BRS2 568 aaKnown RBP16.02■□□□□ 0.16
H3F3B-213ENST00000593254 SAP30BPQ9UHR5 308 aaKnown RBP16.02■□□□□ 0.16
H3F3B-213ENST00000593254 USP17L5A8MUK1 530 aa16.01■□□□□ 0.15
H3F3B-213ENST00000593254 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
H3F3B-213ENST00000593254 ASNSP08243 561 aa16.01■□□□□ 0.15
H3F3B-213ENST00000593254 COL6A1P12109 1028 aa16.01■□□□□ 0.15
H3F3B-213ENST00000593254 PDE6AP16499 860 aa16.01■□□□□ 0.15
H3F3B-213ENST00000593254 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.01■□□□□ 0.15
H3F3B-213ENST00000593254 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
H3F3B-213ENST00000593254 TRIB2Q92519 343 aa16.01■□□□□ 0.15
H3F3B-213ENST00000593254 DNAJC2Q99543 621 aaKnown RBP16.01■□□□□ 0.15
H3F3B-213ENST00000593254 POTEB2H3BUK9 544 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 GOLIM4O00461 696 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 ATP5JP18859 108 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 USP5P45974 858 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 JAG1P78504 1218 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 FAM109BQ6ICB4 259 aaPredicted RBP16■□□□□ 0.15
H3F3B-213ENST00000593254 TRIM34Q9BYJ4 488 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 LRRCC1Q9C099 1032 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 BCL11AQ9H165 835 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 GINM1Q9NU53 330 aa16■□□□□ 0.15
H3F3B-213ENST00000593254 TCRBV5S4A2TA0A5A2 114 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 HMGCS2P54868 508 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 SH3D19Q5HYK7 790 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 EDC3Q96F86 508 aaKnown RBP15.99■□□□□ 0.15
H3F3B-213ENST00000593254 GUCD1Q96NT3 240 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 WDR18Q9BV38 432 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 ASCC2Q9H1I8 757 aaPredicted RBP15.99■□□□□ 0.15
H3F3B-213ENST00000593254 EHD4Q9H223 541 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 AS3MTQ9HBK9 375 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 PAG1Q9NWQ8 432 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 MORF4L1Q9UBU8 362 aa15.99■□□□□ 0.15
H3F3B-213ENST00000593254 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 MAGEB6P1A0A0J9YX57 407 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
H3F3B-213ENST00000593254 PABPC4Q13310 644 aaKnown RBP eCLIP15.98■□□□□ 0.151e-12■■■□□ 16.6
H3F3B-213ENST00000593254 SHROOM1Q2M3G4 852 aaPredicted RBP15.98■□□□□ 0.15
H3F3B-213ENST00000593254 HAUS7Q99871 368 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 BOLA2Q9H3K6 86 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 SERPINB13Q9UIV8 391 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 ZBTB21Q9ULJ3 1066 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 MYH8P13535 1937 aa15.98■□□□□ 0.15
H3F3B-213ENST00000593254 BAZ2AQ9UIF9 1905 aaKnown RBP15.98■□□□□ 0.15
H3F3B-213ENST00000593254 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
H3F3B-213ENST00000593254 GDF11O95390 407 aa15.97■□□□□ 0.15
H3F3B-213ENST00000593254 XRCC5P13010 732 aaKnown RBP15.97■□□□□ 0.15
H3F3B-213ENST00000593254 BACE1P56817 501 aa15.97■□□□□ 0.15
H3F3B-213ENST00000593254 TATDN1Q6P1N9 297 aa15.97■□□□□ 0.15
H3F3B-213ENST00000593254 TTC6Q86TZ1 520 aa15.97■□□□□ 0.15
H3F3B-213ENST00000593254 CRNKL1Q9BZJ0 848 aaKnown RBP15.97■□□□□ 0.15
H3F3B-213ENST00000593254 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
H3F3B-213ENST00000593254 FRMPD3Q5JV73 1810 aa15.96■□□□□ 0.15
H3F3B-213ENST00000593254 CYP2B6P20813 491 aa15.96■□□□□ 0.15
H3F3B-213ENST00000593254 MTMR2Q13614 643 aa15.96■□□□□ 0.15
H3F3B-213ENST00000593254 LRRC26Q2I0M4 334 aa15.96■□□□□ 0.15
H3F3B-213ENST00000593254 LHX8Q68G74 356 aa15.96■□□□□ 0.15
H3F3B-213ENST00000593254 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
H3F3B-213ENST00000593254 ADD2P35612 726 aa15.95■□□□□ 0.14
H3F3B-213ENST00000593254 PLCD1P51178 756 aa15.95■□□□□ 0.14
H3F3B-213ENST00000593254 MDM2Q00987 491 aaPredicted RBP15.95■□□□□ 0.14
H3F3B-213ENST00000593254 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
H3F3B-213ENST00000593254 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
H3F3B-213ENST00000593254 SOCS4Q8WXH5 440 aa15.95■□□□□ 0.14
H3F3B-213ENST00000593254 USP6NLQ92738 828 aa15.95■□□□□ 0.14
H3F3B-213ENST00000593254 USP17L10C9JJH3 530 aa15.94■□□□□ 0.14
H3F3B-213ENST00000593254 GH2P01242 217 aa15.94■□□□□ 0.14
H3F3B-213ENST00000593254 HOXA7P31268 230 aaPredicted RBP15.94■□□□□ 0.14
H3F3B-213ENST00000593254 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
H3F3B-213ENST00000593254 TRMT44Q8IYL2 757 aaKnown RBP15.94■□□□□ 0.14
H3F3B-213ENST00000593254 NUDT12Q9BQG2 462 aa15.94■□□□□ 0.14
H3F3B-213ENST00000593254 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.94■□□□□ 0.141e-8■■■■■ 50
H3F3B-213ENST00000593254 TXNRD2Q9NNW7 524 aa15.94■□□□□ 0.14
H3F3B-213ENST00000593254 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
H3F3B-213ENST00000593254 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
H3F3B-213ENST00000593254 PEX10O60683 326 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 POLR3DP05423 398 aaPredicted RBP15.93■□□□□ 0.14
H3F3B-213ENST00000593254 SHMT1P34896 483 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 GABPAQ06546 454 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 SLFNL1Q499Z3 407 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 SDR42E1Q8WUS8 393 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 P2RX7Q99572 595 aaKnown RBP15.93■□□□□ 0.14
H3F3B-213ENST00000593254 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 ECHDC1Q9NTX5 307 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 MCM9Q9NXL9 1143 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 PCDHB15Q9Y5E8 787 aa15.93■□□□□ 0.14
H3F3B-213ENST00000593254 MBD4O95243 580 aa15.92■□□□□ 0.14
H3F3B-213ENST00000593254 ZKSCAN1P17029 563 aaPredicted RBP15.92■□□□□ 0.14
H3F3B-213ENST00000593254 CCND3P30281 292 aaPredicted RBP15.92■□□□□ 0.14
H3F3B-213ENST00000593254 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
H3F3B-213ENST00000593254 GPRC5AQ8NFJ5 357 aa15.92■□□□□ 0.14
H3F3B-213ENST00000593254 LTBP2Q14767 1821 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms