RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 KIAA1683Q9H0B3 1180 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 ROBO3Q96MS0 1386 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 AKR1B1P15121 316 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 OSBPP22059 807 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-217ENST00000592391 USP14P54578 494 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 ACER1Q8TDN7 264 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 C12orf42Q96LP6 360 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 FAM227BQ96M60 508 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-217ENST00000592391 HPS5Q9UPZ3 1129 aa17.35■□□□□ 0.37
DDX39A-217ENST00000592391 A0A0D9SFI3 127 aa17.34■□□□□ 0.37
DDX39A-217ENST00000592391 FOXP2O15409 715 aa17.34■□□□□ 0.37
DDX39A-217ENST00000592391 ZYXQ15942 572 aaKnown RBP17.34■□□□□ 0.37
DDX39A-217ENST00000592391 MCMDC2Q4G0Z9 681 aa17.34■□□□□ 0.37
DDX39A-217ENST00000592391 NAPBQ9H115 298 aa17.34■□□□□ 0.37
DDX39A-217ENST00000592391 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
DDX39A-217ENST00000592391 CCDC85CA6NKD9 419 aa17.33■□□□□ 0.36
DDX39A-217ENST00000592391 GNRH1P01148 92 aa17.33■□□□□ 0.36
DDX39A-217ENST00000592391 SDSP20132 328 aa17.33■□□□□ 0.36
DDX39A-217ENST00000592391 GCLCP48506 637 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-217ENST00000592391 IRX3P78415 501 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-217ENST00000592391 NMIQ13287 307 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-217ENST00000592391 ARHGAP39Q9C0H5 1083 aa17.33■□□□□ 0.36
DDX39A-217ENST00000592391 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
DDX39A-217ENST00000592391 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 RASA1P20936 1047 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 PSMC4P43686 418 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 ICA1Q05084 483 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 TRIM47Q96LD4 638 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
DDX39A-217ENST00000592391 MYH8P13535 1937 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 VCAM1P19320 739 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 CTGFP29279 349 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 PPARAQ07869 468 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 FAM110CQ1W6H9 321 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 ZNF589Q86UQ0 364 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-217ENST00000592391 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 SIAH1Q8IUQ4 282 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 KANSL2Q9H9L4 492 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
DDX39A-217ENST00000592391 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 HIP1O00291 1037 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 ECM2O94769 699 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-217ENST00000592391 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-217ENST00000592391 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
DDX39A-217ENST00000592391 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
DDX39A-217ENST00000592391 HERVK_113P62684 666 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 ALX1Q15699 326 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 P2RX7Q99572 595 aaKnown RBP17.3■□□□□ 0.36
DDX39A-217ENST00000592391 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDX39A-217ENST00000592391 SH2D4AQ9H788 454 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 TMX2Q9Y320 296 aa17.3■□□□□ 0.36
DDX39A-217ENST00000592391 ZSWIM8A7E2V4 1837 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 HOXD10P28358 340 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
DDX39A-217ENST00000592391 PRMT2P55345 433 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 FCGRTP55899 365 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 PDE4BQ07343 736 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 ZNF444Q8N0Y2 327 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-217ENST00000592391 MORF4L1Q9UBU8 362 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 HTTP42858 3142 aa17.29■□□□□ 0.36
DDX39A-217ENST00000592391 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 PRDM1O75626 825 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 HSPD1P10809 573 aaKnown RBP17.28■□□□□ 0.36
DDX39A-217ENST00000592391 EEF2P13639 858 aaKnown RBP17.28■□□□□ 0.36
DDX39A-217ENST00000592391 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
DDX39A-217ENST00000592391 CATSPERGQ6ZRH7 1159 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-217ENST00000592391 LPAR1Q92633 364 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-217ENST00000592391 SRRDQ9UH36 339 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 PTCH2Q9Y6C5 1203 aa17.28■□□□□ 0.36
DDX39A-217ENST00000592391 FGAP02671 866 aa17.27■□□□□ 0.36
DDX39A-217ENST00000592391 ATP2B2Q01814 1243 aa17.27■□□□□ 0.36
DDX39A-217ENST00000592391 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-217ENST00000592391 VCPKMTQ9H867 229 aa17.27■□□□□ 0.36
DDX39A-217ENST00000592391 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.35
DDX39A-217ENST00000592391 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
DDX39A-217ENST00000592391 TNPO2O14787 897 aaKnown RBP17.26■□□□□ 0.35
DDX39A-217ENST00000592391 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
DDX39A-217ENST00000592391 TXNRD2Q9NNW7 524 aa17.26■□□□□ 0.35
DDX39A-217ENST00000592391 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
DDX39A-217ENST00000592391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms