RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 GABPAQ06546 454 aa22.84■■□□□ 1.25
CCDC43-205ENST00000592333 TXNRD2Q9NNW7 524 aa22.84■■□□□ 1.25
CCDC43-205ENST00000592333 RABGAP1Q9Y3P9 1069 aa22.84■■□□□ 1.25
CCDC43-205ENST00000592333 ZNF532Q9HCE3 1301 aa22.83■■□□□ 1.25
CCDC43-205ENST00000592333 TCRBV5S4A2TA0A5A2 114 aa22.83■■□□□ 1.25
CCDC43-205ENST00000592333 SHMT1P34896 483 aa22.83■■□□□ 1.25
CCDC43-205ENST00000592333 PLCD1P51178 756 aa22.83■■□□□ 1.25
CCDC43-205ENST00000592333 CCNA1P78396 465 aa22.83■■□□□ 1.25
CCDC43-205ENST00000592333 SHROOM1Q2M3G4 852 aaPredicted RBP22.83■■□□□ 1.25
CCDC43-205ENST00000592333 FEZ1Q99689 392 aa22.83■■□□□ 1.25
CCDC43-205ENST00000592333 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
CCDC43-205ENST00000592333 GOLIM4O00461 696 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 RAB3GAP1Q15042 981 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 MAP3K21Q5TCX8 1036 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 CATSPERGQ6ZRH7 1159 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
CCDC43-205ENST00000592333 DNAJC2Q99543 621 aaKnown RBP22.82■■□□□ 1.24
CCDC43-205ENST00000592333 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.82■■□□□ 1.24
CCDC43-205ENST00000592333 ATP8A2Q9NTI2 1148 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 PAG1Q9NWQ8 432 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 MCM9Q9NXL9 1143 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 SWAP70Q9UH65 585 aa22.82■■□□□ 1.24
CCDC43-205ENST00000592333 GLRX3O76003 335 aaKnown RBP22.81■■□□□ 1.24
CCDC43-205ENST00000592333 FXR1P51114 621 aaKnown RBP eCLIP22.81■■□□□ 1.24
CCDC43-205ENST00000592333 USP6NLQ92738 828 aa22.81■■□□□ 1.24
CCDC43-205ENST00000592333 DCP1AQ9NPI6 582 aaPredicted RBP22.81■■□□□ 1.24
CCDC43-205ENST00000592333 PLXNB2O15031 1838 aa22.8■■□□□ 1.24
CCDC43-205ENST00000592333 Q3C1V9 767 aa22.8■■□□□ 1.24
CCDC43-205ENST00000592333 NECAB2Q7Z6G3 386 aa22.8■■□□□ 1.24
CCDC43-205ENST00000592333 PLEKHH3Q7Z736 793 aa22.8■■□□□ 1.24
CCDC43-205ENST00000592333 TRIB2Q92519 343 aa22.8■■□□□ 1.24
CCDC43-205ENST00000592333 HAUS7Q99871 368 aa22.8■■□□□ 1.24
CCDC43-205ENST00000592333 VCAM1P19320 739 aa22.79■■□□□ 1.24
CCDC43-205ENST00000592333 RGS2P41220 211 aa22.79■■□□□ 1.24
CCDC43-205ENST00000592333 MORN1Q5T089 497 aa22.79■■□□□ 1.24
CCDC43-205ENST00000592333 GPR142Q7Z601 462 aa22.79■■□□□ 1.24
CCDC43-205ENST00000592333 APBB1O00213 710 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 CYP2B6P20813 491 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 ADD2P35612 726 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 UBE3CQ15386 1083 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 ZSCAN25Q6NSZ9 544 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 NAV1Q8NEY1 1877 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 LRRCC1Q9C099 1032 aa22.78■■□□□ 1.24
CCDC43-205ENST00000592333 EVI5O60447 810 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 GUCY1A2P33402 732 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 POTEEQ6S8J3 1075 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 TMEM179Q6ZVK1 233 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 LCORLQ8N3X6 602 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 ACER1Q8TDN7 264 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 APBA2Q99767 749 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 PAGR1Q9BTK6 254 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 PORCNQ9H237 461 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 HOXC10Q9NYD6 342 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 OGDHLQ9ULD0 1010 aa22.77■■□□□ 1.24
CCDC43-205ENST00000592333 A0A1W2PPC1 479 aa22.76■■□□□ 1.23
CCDC43-205ENST00000592333 ZKSCAN1P17029 563 aaPredicted RBP22.76■■□□□ 1.23
CCDC43-205ENST00000592333 CHRDL2Q6WN34 429 aa22.76■■□□□ 1.23
CCDC43-205ENST00000592333 AMOTL1Q8IY63 956 aa22.76■■□□□ 1.23
CCDC43-205ENST00000592333 PAWRQ96IZ0 340 aaKnown RBP22.76■■□□□ 1.23
CCDC43-205ENST00000592333 CCDC17Q96LX7 622 aa22.76■■□□□ 1.23
CCDC43-205ENST00000592333 PRO3102Q9H379 93 aa22.76■■□□□ 1.23
CCDC43-205ENST00000592333 BOLA2Q9H3K6 86 aa22.76■■□□□ 1.23
CCDC43-205ENST00000592333 SLC15A5A6NIM6 579 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 CNMDO75829 334 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 PRKAR2AP13861 404 aaKnown RBP22.75■■□□□ 1.23
CCDC43-205ENST00000592333 MAP2K5Q13163 448 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 SEPT2Q15019 361 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 ZYXQ15942 572 aaKnown RBP22.75■■□□□ 1.23
CCDC43-205ENST00000592333 SDR42E1Q8WUS8 393 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 LPAR1Q92633 364 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 NBPF3Q9H094 633 aa22.75■■□□□ 1.23
CCDC43-205ENST00000592333 CWC22Q9HCG8 908 aaKnown RBP22.75■■□□□ 1.23
CCDC43-205ENST00000592333 HOXC6P09630 235 aa22.74■■□□□ 1.23
CCDC43-205ENST00000592333 COG2Q14746 738 aa22.74■■□□□ 1.23
CCDC43-205ENST00000592333 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
CCDC43-205ENST00000592333 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
CCDC43-205ENST00000592333 SH2D4AQ9H788 454 aa22.74■■□□□ 1.23
CCDC43-205ENST00000592333 TRIM32Q13049 653 aa22.73■■□□□ 1.23
CCDC43-205ENST00000592333 MB21D1Q8N884 522 aa22.73■■□□□ 1.23
CCDC43-205ENST00000592333 ARMT1Q9H993 441 aa22.73■■□□□ 1.23
CCDC43-205ENST00000592333 RBM27Q9P2N5 1060 aaKnown RBP22.73■■□□□ 1.23
CCDC43-205ENST00000592333 SPDYE16A6NNV3 312 aaPredicted RBP22.72■■□□□ 1.23
CCDC43-205ENST00000592333 MPHOSPH10O00566 681 aaKnown RBP22.72■■□□□ 1.23
CCDC43-205ENST00000592333 STRNO43815 780 aa22.72■■□□□ 1.23
CCDC43-205ENST00000592333 PEX10O60683 326 aa22.72■■□□□ 1.23
CCDC43-205ENST00000592333 MBD4O95243 580 aa22.72■■□□□ 1.23
CCDC43-205ENST00000592333 PTPREP23469 700 aa22.72■■□□□ 1.23
CCDC43-205ENST00000592333 CACNB2Q08289 660 aaPredicted RBP22.72■■□□□ 1.23
CCDC43-205ENST00000592333 C12orf60Q5U649 245 aa22.72■■□□□ 1.23
CCDC43-205ENST00000592333 IVNS1ABPQ9Y6Y0 642 aa22.72■■□□□ 1.23
CCDC43-205ENST00000592333 A0A1W2PRG0 241 aa22.71■■□□□ 1.23
CCDC43-205ENST00000592333 MNX1P50219 401 aaPredicted RBP22.71■■□□□ 1.23
CCDC43-205ENST00000592333 SHCBP1Q8NEM2 672 aa22.71■■□□□ 1.23
CCDC43-205ENST00000592333 ARHGEF10LQ9HCE6 1279 aa22.71■■□□□ 1.23
CCDC43-205ENST00000592333 ECHDC1Q9NTX5 307 aa22.71■■□□□ 1.23
CCDC43-205ENST00000592333 TMX2Q9Y320 296 aa22.71■■□□□ 1.23
CCDC43-205ENST00000592333 TRIOBPQ9H2D6 2365 aa22.7■■□□□ 1.22
CCDC43-205ENST00000592333 GRB14Q14449 540 aa22.7■■□□□ 1.22
CCDC43-205ENST00000592333 MFSD14CQ5VZR4 134 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms