RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 MPHOSPH10O00566 681 aaKnown RBP32.64■■■□□ 2.82
SMAD4-213ENST00000591914 GCLCP48506 637 aaPredicted RBP32.64■■■□□ 2.82
SMAD4-213ENST00000591914 PRMT2P55345 433 aa32.64■■■□□ 2.82
SMAD4-213ENST00000591914 IRX6P78412 446 aaPredicted RBP32.64■■■□□ 2.82
SMAD4-213ENST00000591914 TMEM179Q6ZVK1 233 aa32.64■■■□□ 2.82
SMAD4-213ENST00000591914 ACER1Q8TDN7 264 aa32.64■■■□□ 2.82
SMAD4-213ENST00000591914 FEZ1Q99689 392 aa32.64■■■□□ 2.82
SMAD4-213ENST00000591914 EPB41L4AQ9HCS5 686 aaPredicted RBP32.64■■■□□ 2.82
SMAD4-213ENST00000591914 MGAMO43451 1857 aa32.63■■■□□ 2.81
SMAD4-213ENST00000591914 ECM2O94769 699 aaPredicted RBP32.63■■■□□ 2.81
SMAD4-213ENST00000591914 FMNL1O95466 1100 aaPredicted RBP32.63■■■□□ 2.81
SMAD4-213ENST00000591914 FAM110CQ1W6H9 321 aa32.63■■■□□ 2.81
SMAD4-213ENST00000591914 ANKRD13CQ8N6S4 541 aa32.63■■■□□ 2.81
SMAD4-213ENST00000591914 ARMC5Q96C12 935 aa32.63■■■□□ 2.81
SMAD4-213ENST00000591914 USP14P54578 494 aa32.62■■■□□ 2.81
SMAD4-213ENST00000591914 FCGRTP55899 365 aa32.62■■■□□ 2.81
SMAD4-213ENST00000591914 SOX10P56693 466 aa32.62■■■□□ 2.81
SMAD4-213ENST00000591914 IRX3P78415 501 aaPredicted RBP32.62■■■□□ 2.81
SMAD4-213ENST00000591914 CCDC17Q96LX7 622 aa32.62■■■□□ 2.81
SMAD4-213ENST00000591914 SRRDQ9UH36 339 aa32.62■■■□□ 2.81
SMAD4-213ENST00000591914 ROBO3Q96MS0 1386 aa32.61■■■□□ 2.81
SMAD4-213ENST00000591914 PATL2C9JE40 543 aaKnown RBP32.61■■■□□ 2.81
SMAD4-213ENST00000591914 AKR1B1P15121 316 aa32.61■■■□□ 2.81
SMAD4-213ENST00000591914 ZYXQ15942 572 aaKnown RBP32.61■■■□□ 2.81
SMAD4-213ENST00000591914 HOXD10P28358 340 aa32.6■■■□□ 2.81
SMAD4-213ENST00000591914 TICAM2Q86XR7 235 aa32.6■■■□□ 2.81
SMAD4-213ENST00000591914 PLEKHM2Q8IWE5 1019 aa32.6■■■□□ 2.81
SMAD4-213ENST00000591914 OSBPL3Q9H4L5 887 aa32.6■■■□□ 2.81
SMAD4-213ENST00000591914 P2RX7Q99572 595 aaKnown RBP32.59■■■□□ 2.81
SMAD4-213ENST00000591914 A0A1W2PRG0 241 aa32.58■■■□□ 2.81
SMAD4-213ENST00000591914 APPP05067 770 aa32.58■■■□□ 2.81
SMAD4-213ENST00000591914 TDO2P48775 406 aa32.58■■■□□ 2.81
SMAD4-213ENST00000591914 HERVK_113P62684 666 aa32.58■■■□□ 2.81
SMAD4-213ENST00000591914 IFNL3Q8IZI9 196 aa32.58■■■□□ 2.81
SMAD4-213ENST00000591914 MORF4L1Q9UBU8 362 aa32.58■■■□□ 2.81
SMAD4-213ENST00000591914 VCAM1P19320 739 aa32.57■■■□□ 2.8
SMAD4-213ENST00000591914 SLC9C1Q4G0N8 1177 aa32.57■■■□□ 2.8
SMAD4-213ENST00000591914 MYPNQ86TC9 1320 aa32.56■■■□□ 2.8
SMAD4-213ENST00000591914 MINDY4BA8MYZ0 360 aa32.56■■■□□ 2.8
SMAD4-213ENST00000591914 SIAH1Q8IUQ4 282 aa32.56■■■□□ 2.8
SMAD4-213ENST00000591914 NACAP1Q9BZK3 213 aa32.56■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L15C9J2P7 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L13C9JLJ4 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L11C9JVI0 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L18D6R9N7 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L22D6RA61 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L17D6RBQ6 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L19D6RCP7 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L20D6RJB6 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 USP17L24Q0WX57 530 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 ZNF333Q96JL9 665 aa32.55■■■□□ 2.8
SMAD4-213ENST00000591914 ICA1Q05084 483 aa32.54■■■□□ 2.8
SMAD4-213ENST00000591914 PRKCZQ05513 592 aa32.54■■■□□ 2.8
SMAD4-213ENST00000591914 CCDC129Q6ZRS4 1044 aa32.54■■■□□ 2.8
SMAD4-213ENST00000591914 NBPF11Q86T75 865 aa32.54■■■□□ 2.8
SMAD4-213ENST00000591914 CLEC10AQ8IUN9 316 aa32.54■■■□□ 2.8
SMAD4-213ENST00000591914 HELLSQ9NRZ9 838 aa32.54■■■□□ 2.8
SMAD4-213ENST00000591914 GREB1LQ9C091 1923 aaPredicted RBP32.53■■■□□ 2.8
SMAD4-213ENST00000591914 TNPO2O14787 897 aaKnown RBP32.53■■■□□ 2.8
SMAD4-213ENST00000591914 FOXP2O15409 715 aa32.53■■■□□ 2.8
SMAD4-213ENST00000591914 CATSPERGQ6ZRH7 1159 aa32.53■■■□□ 2.8
SMAD4-213ENST00000591914 GTF3C2Q8WUA4 911 aaPredicted RBP32.53■■■□□ 2.8
SMAD4-213ENST00000591914 ARHGEF10LQ9HCE6 1279 aa32.53■■■□□ 2.8
SMAD4-213ENST00000591914 TXNRD2Q9NNW7 524 aa32.53■■■□□ 2.8
SMAD4-213ENST00000591914 TRIM6-TRIM34B2RNG4 842 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 RASA1P20936 1047 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 RAET1EQ8TD07 263 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 RBPJLQ9UBG7 517 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 GABRQQ9UN88 632 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 TMX2Q9Y320 296 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 BRCA2P51587 3418 aa32.52■■■□□ 2.8
SMAD4-213ENST00000591914 MLLT1Q03111 559 aaPredicted RBP32.51■■■□□ 2.79
SMAD4-213ENST00000591914 POTEEQ6S8J3 1075 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 SH3TC2Q8TF17 1288 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 FAM227BQ96M60 508 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.51■■■□□ 2.79
SMAD4-213ENST00000591914 NAPBQ9H115 298 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 RPAP3Q9H6T3 665 aaPredicted RBP32.51■■■□□ 2.79
SMAD4-213ENST00000591914 SH2D4AQ9H788 454 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 KANSL2Q9H9L4 492 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 MKNK2Q9HBH9 465 aa32.51■■■□□ 2.79
SMAD4-213ENST00000591914 RBBP6Q7Z6E9 1792 aaKnown RBP32.5■■■□□ 2.79
SMAD4-213ENST00000591914 STK11IPQ8N1F8 1099 aa32.5■■■□□ 2.79
SMAD4-213ENST00000591914 GPRC5AQ8NFJ5 357 aa32.5■■■□□ 2.79
SMAD4-213ENST00000591914 RILPL2Q969X0 211 aa32.5■■■□□ 2.79
SMAD4-213ENST00000591914 A0A0D9SFI3 127 aa32.49■■■□□ 2.79
SMAD4-213ENST00000591914 COA7Q96BR5 231 aa32.49■■■□□ 2.79
SMAD4-213ENST00000591914 ZNF287Q9HBT7 754 aa32.49■■■□□ 2.79
SMAD4-213ENST00000591914 PEX10O60683 326 aa32.48■■■□□ 2.79
SMAD4-213ENST00000591914 EEF2P13639 858 aaKnown RBP32.48■■■□□ 2.79
SMAD4-213ENST00000591914 FLT3LGP49771 235 aa32.48■■■□□ 2.79
SMAD4-213ENST00000591914 MCMDC2Q4G0Z9 681 aa32.48■■■□□ 2.79
SMAD4-213ENST00000591914 KIAA1755Q5JYT7 1200 aa32.48■■■□□ 2.79
SMAD4-213ENST00000591914 LBX2Q6XYB7 198 aa32.48■■■□□ 2.79
SMAD4-213ENST00000591914 LPAR1Q92633 364 aa32.48■■■□□ 2.79
SMAD4-213ENST00000591914 GRK4P32298 578 aa32.47■■■□□ 2.79
SMAD4-213ENST00000591914 IRF5Q13568 498 aa32.47■■■□□ 2.79
SMAD4-213ENST00000591914 VPS53Q5VIR6 699 aa32.47■■■□□ 2.79
SMAD4-213ENST00000591914 DOCK3Q8IZD9 2030 aa32.47■■■□□ 2.79
SMAD4-213ENST00000591914 VCPKMTQ9H867 229 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms