RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 SHOX2O60902 331 aaPredicted RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 XAGE2Q96GT9 111 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 CSRNP2Q9H175 543 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 CCT6AP40227 531 aaKnown RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 AFMP43652 599 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 E2F4Q16254 413 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 SWT1Q5T5J6 900 aaKnown RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 IGDCC4Q8TDY8 1250 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 WASF1Q92558 559 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 KCNJ14Q9UNX9 436 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 EXOC5O00471 708 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 FMNL1O95466 1100 aaPredicted RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 GGCXP38435 758 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 CHRNA2Q15822 529 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 NUP88Q99567 741 aaPredicted RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 GUCA1BQ9UMX6 200 aa20.06■□□□□ 0.8
H3F3B-211ENST00000591893 MYO5AQ9Y4I1 1855 aaKnown RBP20.06■□□□□ 0.8
H3F3B-211ENST00000591893 MYH7P12883 1935 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 RNF225M0QZC1 329 aaPredicted RBP20.05■□□□□ 0.8
H3F3B-211ENST00000591893 ERLIN2O94905 339 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 CRACR2AQ9BSW2 395 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 LY9Q9HBG7 655 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 CAMTA1Q9Y6Y1 1673 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 CDC25AP30304 524 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 GUCY1A2P33402 732 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 SGMS1Q86VZ5 419 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 SMYD4Q8IYR2 804 aaPredicted RBP20.05■□□□□ 0.8
H3F3B-211ENST00000591893 FAM76AQ8TAV0 307 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 MMS19Q96T76 1030 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 FOXP1Q9H334 677 aaPredicted RBP20.05■□□□□ 0.8
H3F3B-211ENST00000591893 MST1RQ04912 1400 aa20.05■□□□□ 0.8
H3F3B-211ENST00000591893 TARSL2A2RTX5 802 aaKnown RBP20.04■□□□□ 0.8
H3F3B-211ENST00000591893 TMEM67Q5HYA8 995 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 GDAP1L1Q96MZ0 367 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 CEP89Q96ST8 783 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 HDAC6Q9UBN7 1215 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 CEP131Q9UPN4 1083 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 PPP1R3GB7ZBB8 358 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 ENC1O14682 589 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 N4BP3O15049 544 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 CASP1P29466 404 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 CCT5P48643 541 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 KAT14Q9H8E8 782 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 TRIM10Q9UDY6 481 aa20.04■□□□□ 0.8
H3F3B-211ENST00000591893 PSMD14O00487 310 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 LIG3P49916 1009 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 KRT31Q15323 416 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 EBAG9O00559 213 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 APPP05067 770 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 IFNAR1P17181 557 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 KRT9P35527 623 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 NR5A1Q13285 461 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 NBPF14Q5TI25 921 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 CCDC91Q7Z6B0 441 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 KAT2BQ92831 832 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 SAR1BQ9Y6B6 198 aa20.03■□□□□ 0.8
H3F3B-211ENST00000591893 A0A087X0B3 334 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 AGPSO00116 658 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 TRIM14Q14142 442 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 GPATCH11Q8N954 259 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 PAGE5Q96GU1 130 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 REXO2Q9Y3B8 237 aaKnown RBP20.02■□□□□ 0.8
H3F3B-211ENST00000591893 EPN1Q9Y6I3 576 aaPredicted RBP20.02■□□□□ 0.8
H3F3B-211ENST00000591893 FAM169AQ9Y6X4 670 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 LAMB4A4D0S4 1761 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 GOLGA6CA6NDK9 693 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 NDUFA10O95299 355 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 GOLGA6DP0CG33 693 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 IRAK1P51617 712 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 GSDMAQ96QA5 445 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 CHP1Q99653 195 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.02■□□□□ 0.8
H3F3B-211ENST00000591893 VPS16Q9H269 839 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 GOLGA6AQ9NYA3 693 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 LIMA1Q9UHB6 759 aaKnown RBP20.02■□□□□ 0.8
H3F3B-211ENST00000591893 CTNND2Q9UQB3 1225 aa20.02■□□□□ 0.8
H3F3B-211ENST00000591893 ZMYND10O75800 440 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 ATP1A1P05023 1023 aaKnown RBP20.01■□□□□ 0.79
H3F3B-211ENST00000591893 PHKG2P15735 406 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 SH3RF1Q7Z6J0 888 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 RPGRIP1Q96KN7 1286 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 SELENOOQ9BVL4 669 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 TBC1D2BQ9UPU7 963 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 TEX2Q8IWB9 1127 aa20.01■□□□□ 0.79
H3F3B-211ENST00000591893 LRRC10BA6NIK2 292 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 SRGAP2O75044 1071 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 LIFRP42702 1097 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 DPYDQ12882 1025 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 GSPT2Q8IYD1 628 aaKnown RBP20■□□□□ 0.79
H3F3B-211ENST00000591893 TRIM22Q8IYM9 498 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 RAPGEF4Q8WZA2 1011 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 EPSTI1Q96J88 318 aa20■□□□□ 0.79
H3F3B-211ENST00000591893 CAPZA3Q96KX2 299 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms