RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 ICA1Q05084 483 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 IQCA1Q86XH1 822 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 WNK4Q96J92 1243 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 CLIP2Q9UDT6 1046 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 EEF2P13639 858 aaKnown RBP21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 SIAH1Q8IUQ4 282 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 ZNF280CQ8ND82 737 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 ACER1Q8TDN7 264 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 AS3MTQ9HBK9 375 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 MTMR4Q9NYA4 1195 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 STX8Q9UNK0 236 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 AFG3L2Q9Y4W6 797 aa21.62■■□□□ 1.05
CROCCP3-205ENST00000591316 RASSF10A6NK89 507 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 PSMA5P28066 241 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 ECE1P42892 770 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 SPRYD7Q5W111 196 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 RASAL3Q86YV0 1011 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 MB21D2Q8IYB1 491 aaPredicted RBP21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 CCDC102AQ96A19 550 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 HHIPL1Q96JK4 782 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 TCEANC2Q96MN5 208 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 UBAC1Q9BSL1 405 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 IGKV6D-41A0A0C4DH26 115 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 RAD21O60216 631 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 CASTP20810 708 aaKnown RBP21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 MCM5P33992 734 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 CHMP4CQ96CF2 233 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 ZSCAN10Q96SZ4 725 aaPredicted RBP21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 LRRC2Q9BYS8 371 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 TCP11L1Q9NUJ3 509 aa21.61■■□□□ 1.05
CROCCP3-205ENST00000591316 LAMA4Q16363 1823 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 A0A1W2PRG0 241 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 IFIT3O14879 490 aaKnown RBP21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 PRC1O43663 620 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 TTLL1O95922 423 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 ANTXR2P58335 489 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 PPIL2Q13356 520 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 BLOC1S2Q6QNY1 142 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 FEZ1Q99689 392 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 ARHGEF10LQ9HCE6 1279 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 MYH8P13535 1937 aa21.6■■□□□ 1.05
CROCCP3-205ENST00000591316 USP17L10C9JJH3 530 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 ANAPC15P60006 121 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 DGKZQ13574 1117 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 MTMR2Q13614 643 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 DHX32Q7L7V1 743 aaKnown RBP21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 CAPNS2Q96L46 248 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 WDR18Q9BV38 432 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
CROCCP3-205ENST00000591316 ERICH2A1L162 156 aa21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 FAM155AB1AL88 458 aaPredicted RBP21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 SLC10A3P09131 477 aa21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 HMGB1P09429 215 aaKnown RBP21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 NT5C2P49902 561 aa21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 UPF3BQ9BZI7 483 aaKnown RBP21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 NYAP2Q9P242 653 aa21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 MTMR7Q9Y216 660 aa21.58■■□□□ 1.05
CROCCP3-205ENST00000591316 TNKSO95271 1327 aa21.58■■□□□ 1.04
CROCCP3-205ENST00000591316 AOC2O75106 756 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 BACE1P56817 501 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 TMEM67Q5HYA8 995 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 LRRC47Q8N1G4 583 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 ZIC5Q96T25 663 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 TBC1D2Q9BYX2 928 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 GPHNQ9NQX3 736 aaPredicted RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 DOCK1Q14185 1865 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 PLIN4Q96Q06 1357 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 CXCL11O14625 94 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 ZBTB48P10074 688 aaPredicted RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 RBM25P49756 843 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 VEGFBP49765 207 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 HMGCS2P54868 508 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 FGD1P98174 961 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 EXOSC10Q01780 885 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 SART3Q15020 963 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 CCDC178Q5BJE1 867 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 ENAHQ8N8S7 591 aaPredicted RBP21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 IGDCC4Q8TDY8 1250 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 TTC14Q96N46 770 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 ZSWIM6Q9HCJ5 1215 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 CYP46A1Q9Y6A2 500 aa21.57■■□□□ 1.04
CROCCP3-205ENST00000591316 RPS6KB1P23443 525 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 SNAPC2Q13487 334 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 IFIT1BQ5T764 474 aaKnown RBP21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 RCSD1Q6JBY9 416 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 DGKHQ86XP1 1220 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 TMEM47Q9BQJ4 181 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 SENP2Q9HC62 589 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 TMX2Q9Y320 296 aa21.56■■□□□ 1.04
CROCCP3-205ENST00000591316 WDR33Q9C0J8 1336 aaKnown RBP21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 ATAD5Q96QE3 1844 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 GTF2A2P52657 109 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 WTAPQ15007 396 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 PPP4R3BQ5MIZ7 849 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 GADL1Q6ZQY3 521 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 SPICE1Q8N0Z3 855 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 MKL1Q969V6 931 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 MS4A4AQ96JQ5 239 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms