RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 PPARDQ03181 441 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 KRT31Q15323 416 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 EARS2Q5JPH6 523 aaKnown RBP12.37□□□□□ -0.43
LINC01140-210ENST00000590653 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 GREM2Q9H772 168 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 ERCC5P28715 1186 aaPredicted RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 UBXN1Q04323 297 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 KANK3Q6NY19 840 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 APTXQ7Z2E3 356 aaKnown RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 IFNL3Q8IZI9 196 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 MSANTD4Q8NCY6 345 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 HNRNPLLQ8WVV9 542 aaKnown RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 WASF1Q92558 559 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 RAB21Q9UL25 225 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 TTF2Q9UNY4 1162 aaKnown RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 SRPRBQ9Y5M8 271 aaKnown RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 WNT7AO00755 349 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 ITGA6P23229 1130 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 MATR3P43243 847 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 E2F4Q16254 413 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 ACBD3Q9H3P7 528 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 IFNAR1P17181 557 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 MICALL1Q8N3F8 863 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 FAM71BQ8TC56 605 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
LINC01140-210ENST00000590653 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 PLIN2Q99541 437 aa12.36□□□□□ -0.43
LINC01140-210ENST00000590653 SART3Q15020 963 aaKnown RBP12.35□□□□□ -0.43
LINC01140-210ENST00000590653 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 RASSF8Q8NHQ8 419 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
LINC01140-210ENST00000590653 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
LINC01140-210ENST00000590653 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 ABHD10Q9NUJ1 306 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 AFDNP55196 1824 aaKnown RBP12.35□□□□□ -0.43
LINC01140-210ENST00000590653 KAT6BQ8WYB5 2073 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 USP5P45974 858 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
LINC01140-210ENST00000590653 CCDC122Q5T0U0 273 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
LINC01140-210ENST00000590653 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
LINC01140-210ENST00000590653 ZNF185O15231 689 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 ANKLE2Q86XL3 938 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 CTAGE1Q96RT6 745 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 PSMB7Q99436 277 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 UBAC1Q9BSL1 405 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 EHD4Q9H223 541 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 EPN1Q9Y6I3 576 aaPredicted RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 C5P01031 1676 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 MEGF6O75095 1541 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 ATP1A1P05023 1023 aaKnown RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 CUL4BQ13620 913 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 AKNAD1Q5T1N1 836 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 STRN4Q9NRL3 753 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 GNL3LQ9NVN8 582 aaKnown RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 MACROD2A1Z1Q3 448 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 DEXIO95424 95 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 FANCBQ8NB91 859 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 ANKRD20A12PQ8NF67 263 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 FOXP1Q9H334 677 aaPredicted RBP12.34□□□□□ -0.43
LINC01140-210ENST00000590653 JADE2Q9NQC1 790 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 GDAQ9Y2T3 454 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 JRKLQ9Y4A0 524 aa12.34□□□□□ -0.43
LINC01140-210ENST00000590653 TRIM49BA6NDI0 452 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 GGCXP38435 758 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 MAGEA9P43362 315 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 LIG3P49916 1009 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
LINC01140-210ENST00000590653 TCIRG1Q13488 830 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 SGMS1Q86VZ5 419 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 MCM7P33993 719 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 CCT5P48643 541 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 STIM1Q13586 685 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 GPATCH11Q8N954 259 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 NELFBQ8WX92 580 aa12.33□□□□□ -0.44
LINC01140-210ENST00000590653 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms