RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CTGFP29279 349 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 PICALMQ13492 652 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 C12orf60Q5U649 245 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 GPAT2Q6NUI2 795 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 SH3BP5LQ7L8J4 393 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 FASTKD5Q7L8L6 764 aaKnown RBP19.66■□□□□ 0.74
GCDH-213ENST00000590627 TRIM47Q96LD4 638 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 DHX36Q9H2U1 1008 aaKnown RBP19.66■□□□□ 0.74
GCDH-213ENST00000590627 PICK1Q9NRD5 415 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 PALD1Q9ULE6 856 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 ZHX2Q9Y6X8 837 aa19.66■□□□□ 0.74
GCDH-213ENST00000590627 DDX60LQ5H9U9 1706 aaKnown RBP19.65■□□□□ 0.74
GCDH-213ENST00000590627 A0A0G2JLL6 359 aaPredicted RBP19.65■□□□□ 0.74
GCDH-213ENST00000590627 BCRP11274 1271 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 OSBPP22059 807 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 PPARAQ07869 468 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 HABP4Q5JVS0 413 aaKnown RBP19.65■□□□□ 0.74
GCDH-213ENST00000590627 PRRT2Q7Z6L0 340 aaPredicted RBP19.65■□□□□ 0.74
GCDH-213ENST00000590627 ZSCAN29Q8IWY8 852 aaPredicted RBP19.65■□□□□ 0.74
GCDH-213ENST00000590627 AMOTL1Q8IY63 956 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 RASEFQ8IZ41 740 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 TAOK2Q9UL54 1235 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 SNX14Q9Y5W7 946 aa19.65■□□□□ 0.74
GCDH-213ENST00000590627 CTNND1O60716 968 aaKnown RBP19.64■□□□□ 0.73
GCDH-213ENST00000590627 FMNL1O95466 1100 aaPredicted RBP19.64■□□□□ 0.73
GCDH-213ENST00000590627 PTPRAP18433 802 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 NBPF3Q9H094 633 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
GCDH-213ENST00000590627 SLC45A1Q9Y2W3 748 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 AFG3L2Q9Y4W6 797 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 ROBO3Q96MS0 1386 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 DOCK1Q14185 1865 aa19.64■□□□□ 0.73
GCDH-213ENST00000590627 NAV1Q8NEY1 1877 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 MYPNQ86TC9 1320 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 DDTLA6NHG4 134 aaPredicted RBP19.63■□□□□ 0.73
GCDH-213ENST00000590627 MINDY4BA8MYZ0 360 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 MYCP01106 439 aaPredicted RBP19.63■□□□□ 0.73
GCDH-213ENST00000590627 POLR3DP05423 398 aaPredicted RBP19.63■□□□□ 0.73
GCDH-213ENST00000590627 FGRP09769 529 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 CYP2D6P10635 497 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 PCP11498 1178 aaKnown RBP19.63■□□□□ 0.73
GCDH-213ENST00000590627 GRK4P32298 578 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 HAND2P61296 217 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 KRT32Q14532 448 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 RAET1EQ8TD07 263 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 TAF6LQ9Y6J9 622 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 PTPRFP10586 1907 aa19.63■□□□□ 0.73
GCDH-213ENST00000590627 CYP2D7A0A087X1C5 515 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 TBC1D12O60347 775 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 SLC3A2P08195 630 aaKnown RBP19.62■□□□□ 0.73
GCDH-213ENST00000590627 CYP2C8P10632 490 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 PLCD1P51178 756 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 FCGRTP55899 365 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 TBC1D10CQ8IV04 446 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 STAG1Q8WVM7 1258 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 KIF2CQ99661 725 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 EHD4Q9H223 541 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 PI4KBQ9UBF8 816 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 BAZ2AQ9UIF9 1905 aaKnown RBP19.62■□□□□ 0.73
GCDH-213ENST00000590627 MGAMO43451 1857 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 LAMA4Q16363 1823 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 PHIPQ8WWQ0 1821 aa19.62■□□□□ 0.73
GCDH-213ENST00000590627 ECM2O94769 699 aaPredicted RBP19.61■□□□□ 0.73
GCDH-213ENST00000590627 HLA-DOAP06340 250 aa19.61■□□□□ 0.73
GCDH-213ENST00000590627 GABPAQ06546 454 aa19.61■□□□□ 0.73
GCDH-213ENST00000590627 MTFR1Q15390 333 aa19.61■□□□□ 0.73
GCDH-213ENST00000590627 AKNAD1Q5T1N1 836 aa19.61■□□□□ 0.73
GCDH-213ENST00000590627 METTL16Q86W50 562 aaKnown RBP19.61■□□□□ 0.73
GCDH-213ENST00000590627 NKX2-3Q8TAU0 364 aa19.61■□□□□ 0.73
GCDH-213ENST00000590627 TM6SF1Q9BZW5 370 aa19.61■□□□□ 0.73
GCDH-213ENST00000590627 RNF41Q9H4P4 317 aaPredicted RBP19.61■□□□□ 0.73
GCDH-213ENST00000590627 CEP290O15078 2479 aa19.6■□□□□ 0.73
GCDH-213ENST00000590627 E7EWF7 191 aa19.6■□□□□ 0.73
GCDH-213ENST00000590627 NT5C2P49902 561 aa19.6■□□□□ 0.73
GCDH-213ENST00000590627 CTDSPL2Q05D32 466 aa19.6■□□□□ 0.73
GCDH-213ENST00000590627 STOX1Q6ZVD7 989 aa19.6■□□□□ 0.73
GCDH-213ENST00000590627 FOXP4Q8IVH2 680 aaPredicted RBP19.6■□□□□ 0.73
GCDH-213ENST00000590627 MYH1P12882 1939 aa19.6■□□□□ 0.73
GCDH-213ENST00000590627 SMIM22K7EJ46 135 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 ORC4O43929 436 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 PSMA5P28066 241 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 UBXN2AP68543 259 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 EVX2Q03828 476 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 PRKCZQ05513 592 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 GADL1Q6ZQY3 521 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 MFSD6Q6ZSS7 791 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 C16orf86Q6ZW13 317 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 SLAIN1Q8ND83 568 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 SERPINB13Q9UIV8 391 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.59■□□□□ 0.73
GCDH-213ENST00000590627 TACC3Q9Y6A5 838 aa19.59■□□□□ 0.73
GCDH-213ENST00000590627 GJB1P08034 283 aa19.58■□□□□ 0.72
GCDH-213ENST00000590627 PDE4BQ07343 736 aa19.58■□□□□ 0.72
GCDH-213ENST00000590627 ADCK5Q3MIX3 580 aa19.58■□□□□ 0.72
GCDH-213ENST00000590627 SHISA4Q96DD7 197 aa19.58■□□□□ 0.72
GCDH-213ENST00000590627 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
GCDH-213ENST00000590627 ZNF287Q9HBT7 754 aa19.58■□□□□ 0.72
GCDH-213ENST00000590627 TRIM75PA6NK02 468 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms