RNA–Protein interactions for RNA: ENST00000590135.5

U2AF1L4-213, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-213	ENST00000590135	MYRIP	Q8NFW9	859 aa		13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	NKX2-3	Q8TAU0	364 aa		13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	AIFM3	Q96NN9	605 aa		13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KCND1	Q9NSA2	647 aa		13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	FAM13B	Q9NYF5	915 aa		13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CCNL1	Q9UK58	526 aa	Predicted RBP	13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KIF3C	O14782	793 aa		13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	GNPAT	O15228	680 aa		13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	RXRA	P19793	462 aa		13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	PTPRE	P23469	700 aa		13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	IFIT1B	Q5T764	474 aa	Known RBP	13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	WDR66	Q8TBY9	1149 aa		13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	ZNF830	Q96NB3	372 aa	Predicted RBP	13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	BRMS1	Q9HCU9	246 aa		13.75	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MYH6	P13533	1939 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	UQCRHL	A0A096LP55	91 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MINDY4B	A8MYZ0	360 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	UQCRH	P07919	91 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	GSTO1	P78417	241 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	PDE4B	Q07343	736 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	SHC4	Q6S5L8	630 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CCDC144CP	Q8IYA2	1237 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	ENAH	Q8N8S7	591 aa	Predicted RBP	13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TRIML1	Q8N9V2	468 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	SDR42E1	Q8WUS8	393 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	C8orf37	Q96NL8	207 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MYL10	Q9BUA6	226 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	GJB4	Q9NTQ9	266 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MROH7-TTC4	A0A0A0MT08	1334 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	IRS2	Q9Y4H2	1338 aa		13.74	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KCNJ6	P48051	423 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MECOM	Q03112	1051 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CTR9	Q6PD62	1173 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	AOPEP	Q8N6M6	819 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CCDC150	Q8NCX0	1101 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	INCENP	Q9NQS7	918 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	DACH1	Q9UI36	760 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KCNH3	Q9ULD8	1083 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	ROBO3	Q96MS0	1386 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	DPYSL4	O14531	572 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	NRDC	O43847	1150 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	PIP4K2B	P78356	416 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	DPCR1	Q3MIW9	517 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KRBA2	Q6ZNG9	492 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	PYM1	Q9BRP8	204 aa	Known RBP	13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	PYCARD	Q9ULZ3	195 aa		13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	SRPRB	Q9Y5M8	271 aa	Known RBP	13.73	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	SBF2	Q86WG5	1849 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	BTBD18	B2RXH4	712 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CBFA2T2	O43439	604 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MARCKS	P29966	332 aa	Predicted RBP	13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TM4SF1	P30408	202 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TRAPPC10	P48553	1259 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	FUT2	Q10981	343 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TROAP	Q12815	778 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	GRAP	Q13588	217 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	LRRC8A	Q8IWT6	810 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	GRAPL	Q8TC17	118 aa	Predicted RBP	13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	NUP133	Q8WUM0	1156 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	ANKS1A	Q92625	1134 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	FERMT2	Q96AC1	680 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	PHF20	Q9BVI0	1012 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	EMILIN3	Q9NT22	766 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	FBXO2	Q9UK22	296 aa	Predicted RBP	13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	USP21	Q9UK80	565 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TAF1	P21675	1872 aa		13.72	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	XDH	P47989	1333 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KIF2A	O00139	706 aa	Predicted RBP	13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	LDHC	P07864	332 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KIF5B	P33176	963 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	KRT2	P35908	639 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MYL5	Q02045	173 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TRAPPC3L	Q5T215	181 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	NT5DC1	Q5TFE4	455 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	OLFM4	Q6UX06	510 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	BICDL1	Q6ZP65	573 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TMTC3	Q6ZXV5	915 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	AMOTL1	Q8IY63	956 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	CTCFL	Q8NI51	663 aa	Predicted RBP	13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	ZNF384	Q8TF68	577 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	ZKSCAN3	Q9BRR0	538 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	MYH2	Q9UKX2	1941 aa		13.71	□□□□□ -0.21
U2AF1L4-213	ENST00000590135	TRIM75P	A6NK02	468 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	USP17L12	C9JPN9	530 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	USP17L21	D6R901	530 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	ONECUT3	O60422	494 aa	Predicted RBP	13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	TUBB4A	P04350	444 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	RFC4	P35249	363 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	TOB1	P50616	345 aa	Predicted RBP	13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	PPP4C	P60510	307 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	DYNLL1	P63167	89 aa	Known RBP	13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	STK11IP	Q8N1F8	1099 aa		13.71	□□□□□ -0.22
U2AF1L4-213	ENST00000590135	CNNM3	Q8NE01	707 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms