RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 ZKSCAN3Q9BRR0 538 aa11.95□□□□□ -0.5
APOC1-205ENST00000589781 R3HDMLQ9H3Y0 253 aa11.95□□□□□ -0.5
APOC1-205ENST00000589781 LY9Q9HBG7 655 aa11.95□□□□□ -0.5
APOC1-205ENST00000589781 DDX4Q9NQI0 724 aaKnown RBP11.95□□□□□ -0.5
APOC1-205ENST00000589781 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
APOC1-205ENST00000589781 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
APOC1-205ENST00000589781 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
APOC1-205ENST00000589781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
APOC1-205ENST00000589781 ATRNL1Q5VV63 1379 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 MYH6P13533 1939 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 IFIT3O14879 490 aaKnown RBP11.94□□□□□ -0.5
APOC1-205ENST00000589781 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
APOC1-205ENST00000589781 PLCG2P16885 1265 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
APOC1-205ENST00000589781 MCM4P33991 863 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 FOSBP53539 338 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
APOC1-205ENST00000589781 FKBP1CQ5VVH2 108 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 FAM83AQ86UY5 434 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 CERS3Q8IU89 383 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
APOC1-205ENST00000589781 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 ZNF274Q96GC6 653 aaPredicted RBP11.94□□□□□ -0.5
APOC1-205ENST00000589781 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 TCHHQ07283 1943 aa11.94□□□□□ -0.5
APOC1-205ENST00000589781 OTOFQ9HC10 1997 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 RXRAP19793 462 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 EVCP57679 992 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 TCP10Q12799 353 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 PICALMQ13492 652 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 NFXL1Q6ZNB6 911 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 ARMC9Q7Z3E5 817 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.93□□□□□ -0.54e-15■■■□□ 17.6
APOC1-205ENST00000589781 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 ESR2Q92731 530 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 GBP4Q96PP9 640 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 ZSWIM5Q9P217 1185 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
APOC1-205ENST00000589781 TNKSO95271 1327 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
APOC1-205ENST00000589781 GOLGA8AA7E2F4 631 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 STX6O43752 255 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 ORC4O43929 436 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
APOC1-205ENST00000589781 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
APOC1-205ENST00000589781 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
APOC1-205ENST00000589781 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
APOC1-205ENST00000589781 SYT1P21579 422 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 NF2P35240 595 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 TM4SF4P48230 202 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 WTAPQ15007 396 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 SUPT20HL1Q3ZLR7 823 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 MICU3Q86XE3 530 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 AMOTL1Q8IY63 956 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 SMARCC2Q8TAQ2 1214 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 FAM151AQ8WW52 585 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 WNK4Q96J92 1243 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 PTPN18Q99952 460 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 SNCAIPQ9Y6H5 919 aa11.92□□□□□ -0.5
APOC1-205ENST00000589781 ERICH2A1L162 156 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 DDTLA6NHG4 134 aaPredicted RBP11.91□□□□□ -0.5
APOC1-205ENST00000589781 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 TRPA1O75762 1119 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 FGRP09769 529 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
APOC1-205ENST00000589781 METAP2P50579 478 aaKnown RBP eCLIP11.91□□□□□ -0.5
APOC1-205ENST00000589781 PDE4BQ07343 736 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 TNFAIP1Q13829 316 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 VGLL4Q14135 290 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
APOC1-205ENST00000589781 MIGA2Q7L4E1 593 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 LLPHQ9BRT6 129 aaKnown RBP11.91□□□□□ -0.5
APOC1-205ENST00000589781 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
APOC1-205ENST00000589781 ZNF112Q9UJU3 913 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 NID2Q14112 1375 aa11.91□□□□□ -0.5
APOC1-205ENST00000589781 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
APOC1-205ENST00000589781 ZBTB43O43298 467 aa11.9□□□□□ -0.5
APOC1-205ENST00000589781 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
APOC1-205ENST00000589781 F13A1P00488 732 aa11.9□□□□□ -0.5
APOC1-205ENST00000589781 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
APOC1-205ENST00000589781 INPP5BP32019 993 aa11.9□□□□□ -0.5
APOC1-205ENST00000589781 LIFRP42702 1097 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms