RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
H3F3B-208ENST00000589599 BCRP11274 1271 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 HOXD10P28358 340 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 HOXA7P31268 230 aaPredicted RBP20.19■□□□□ 0.82
H3F3B-208ENST00000589599 GUCY1A2P33402 732 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 NAPBQ9H115 298 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
H3F3B-208ENST00000589599 EMILIN3Q9NT22 766 aa20.19■□□□□ 0.82
H3F3B-208ENST00000589599 ATAD5Q96QE3 1844 aa20.18■□□□□ 0.82
H3F3B-208ENST00000589599 SMIM22K7EJ46 135 aa20.18■□□□□ 0.82
H3F3B-208ENST00000589599 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
H3F3B-208ENST00000589599 AKR1B1P15121 316 aa20.18■□□□□ 0.82
H3F3B-208ENST00000589599 PSMC4P43686 418 aa20.18■□□□□ 0.82
H3F3B-208ENST00000589599 ZYXQ15942 572 aaKnown RBP20.18■□□□□ 0.82
H3F3B-208ENST00000589599 EPB41L4AQ9HCS5 686 aaPredicted RBP20.18■□□□□ 0.82
H3F3B-208ENST00000589599 PRMT2P55345 433 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 FCGRTP55899 365 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 C12orf42Q96LP6 360 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 SH2D4AQ9H788 454 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 ARHGEF10LQ9HCE6 1279 aa20.17■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L15C9J2P7 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L13C9JLJ4 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L11C9JVI0 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L18D6R9N7 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L22D6RA61 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L17D6RBQ6 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L19D6RCP7 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L20D6RJB6 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 HIP1O00291 1037 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 ECM2O94769 699 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-208ENST00000589599 SDSP20132 328 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 USP17L24Q0WX57 530 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 ZNF444Q8N0Y2 327 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-208ENST00000589599 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 ANKRD13CQ8N6S4 541 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 FAM227BQ96M60 508 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 KANSL2Q9H9L4 492 aa20.16■□□□□ 0.82
H3F3B-208ENST00000589599 PDE4AP27815 886 aa20.15■□□□□ 0.82
H3F3B-208ENST00000589599 MFAP1P55081 439 aaKnown RBP20.15■□□□□ 0.82
H3F3B-208ENST00000589599 CAP1Q01518 475 aa20.15■□□□□ 0.82
H3F3B-208ENST00000589599 ICA1Q05084 483 aa20.15■□□□□ 0.82
H3F3B-208ENST00000589599 PDE4BQ07343 736 aa20.15■□□□□ 0.82
H3F3B-208ENST00000589599 NMIQ13287 307 aaPredicted RBP20.15■□□□□ 0.82
H3F3B-208ENST00000589599 TRIM47Q96LD4 638 aa20.15■□□□□ 0.82
H3F3B-208ENST00000589599 P2RX7Q99572 595 aaKnown RBP20.15■□□□□ 0.82
H3F3B-208ENST00000589599 DIAPH3Q9NSV4 1193 aa20.15■□□□□ 0.82
H3F3B-208ENST00000589599 ROBO3Q96MS0 1386 aa20.14■□□□□ 0.81
H3F3B-208ENST00000589599 A0A0D9SFI3 127 aa20.14■□□□□ 0.81
H3F3B-208ENST00000589599 ATP2B2Q01814 1243 aa20.14■□□□□ 0.81
H3F3B-208ENST00000589599 FAM110CQ1W6H9 321 aa20.14■□□□□ 0.81
H3F3B-208ENST00000589599 GTF3C2Q8WUA4 911 aaPredicted RBP20.14■□□□□ 0.81
H3F3B-208ENST00000589599 BAZ2AQ9UIF9 1905 aaKnown RBP20.14■□□□□ 0.81
H3F3B-208ENST00000589599 A0A1W2PRG0 241 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 VCAM1P19320 739 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 RASA1P20936 1047 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 HERVK_113P62684 666 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 PPARAQ07869 468 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 ALX1Q15699 326 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 SRRDQ9UH36 339 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 TMX2Q9Y320 296 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 PTPRFP10586 1907 aa20.13■□□□□ 0.81
H3F3B-208ENST00000589599 VPS53Q5VIR6 699 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 CATSPERGQ6ZRH7 1159 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 NBPF11Q86T75 865 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 SIAH1Q8IUQ4 282 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 GPRC5AQ8NFJ5 357 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 LPAR1Q92633 364 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 LOC285556D6RIA3 1793 aa20.12■□□□□ 0.81
H3F3B-208ENST00000589599 CCDC171Q6TFL3 1326 aa20.11■□□□□ 0.81
H3F3B-208ENST00000589599 TNPO2O14787 897 aaKnown RBP20.11■□□□□ 0.81
H3F3B-208ENST00000589599 EEF2P13639 858 aaKnown RBP20.11■□□□□ 0.81
H3F3B-208ENST00000589599 CTGFP29279 349 aa20.11■□□□□ 0.81
H3F3B-208ENST00000589599 TTC22Q5TAA0 569 aa20.11■□□□□ 0.81
H3F3B-208ENST00000589599 RAET1EQ8TD07 263 aa20.11■□□□□ 0.81
H3F3B-208ENST00000589599 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
H3F3B-208ENST00000589599 MORF4L1Q9UBU8 362 aa20.11■□□□□ 0.81
H3F3B-208ENST00000589599 PTCH2Q9Y6C5 1203 aa20.11■□□□□ 0.81
H3F3B-208ENST00000589599 MYPNQ86TC9 1320 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 FOXP2O15409 715 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 PRDM1O75626 825 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 SLC9C1Q4G0N8 1177 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
H3F3B-208ENST00000589599 CLEC10AQ8IUN9 316 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 COA7Q96BR5 231 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 GOPCQ9HD26 462 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 HOXC10Q9NYD6 342 aa20.1■□□□□ 0.81
H3F3B-208ENST00000589599 FGAP02671 866 aa20.09■□□□□ 0.81
H3F3B-208ENST00000589599 TSPY3P0CV98 308 aa20.09■□□□□ 0.81
H3F3B-208ENST00000589599 TSPY8P0CW00 308 aa20.09■□□□□ 0.81
H3F3B-208ENST00000589599 HSPD1P10809 573 aaKnown RBP20.09■□□□□ 0.81
H3F3B-208ENST00000589599 ZNF589Q86UQ0 364 aaPredicted RBP20.09■□□□□ 0.81
H3F3B-208ENST00000589599 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
H3F3B-208ENST00000589599 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.09■□□□□ 0.81
H3F3B-208ENST00000589599 TANGO6Q9C0B7 1094 aa20.09■□□□□ 0.81
H3F3B-208ENST00000589599 VCPKMTQ9H867 229 aa20.09■□□□□ 0.81
H3F3B-208ENST00000589599 RBPJLQ9UBG7 517 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms