RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 ASCC2Q9H1I8 757 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-208ENST00000589165 EPB41L4AQ9HCS5 686 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-208ENST00000589165 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
ERCC1-208ENST00000589165 LOC285556D6RIA3 1793 aa16.6■□□□□ 0.25
ERCC1-208ENST00000589165 PSMC4P43686 418 aa16.6■□□□□ 0.25
ERCC1-208ENST00000589165 GCLCP48506 637 aaPredicted RBP16.6■□□□□ 0.25
ERCC1-208ENST00000589165 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
ERCC1-208ENST00000589165 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
ERCC1-208ENST00000589165 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
ERCC1-208ENST00000589165 CTGFP29279 349 aa16.59■□□□□ 0.25
ERCC1-208ENST00000589165 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
ERCC1-208ENST00000589165 IFNL3Q8IZI9 196 aa16.59■□□□□ 0.25
ERCC1-208ENST00000589165 FEZ1Q99689 392 aa16.59■□□□□ 0.25
ERCC1-208ENST00000589165 NACAP1Q9BZK3 213 aa16.59■□□□□ 0.25
ERCC1-208ENST00000589165 HELLSQ9NRZ9 838 aa16.59■□□□□ 0.25
ERCC1-208ENST00000589165 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.25
ERCC1-208ENST00000589165 APPP05067 770 aa16.58■□□□□ 0.24
ERCC1-208ENST00000589165 AKR1B1P15121 316 aa16.58■□□□□ 0.24
ERCC1-208ENST00000589165 TDO2P48775 406 aa16.58■□□□□ 0.24
ERCC1-208ENST00000589165 FCGRTP55899 365 aa16.58■□□□□ 0.24
ERCC1-208ENST00000589165 IRX3P78415 501 aaPredicted RBP16.58■□□□□ 0.24
ERCC1-208ENST00000589165 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
ERCC1-208ENST00000589165 FMNL1O95466 1100 aaPredicted RBP16.57■□□□□ 0.24
ERCC1-208ENST00000589165 HOXD10P28358 340 aa16.57■□□□□ 0.24
ERCC1-208ENST00000589165 RGS19P49795 217 aa16.57■□□□□ 0.24
ERCC1-208ENST00000589165 ARMC5Q96C12 935 aa16.57■□□□□ 0.24
ERCC1-208ENST00000589165 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
ERCC1-208ENST00000589165 SRRDQ9UH36 339 aa16.57■□□□□ 0.24
ERCC1-208ENST00000589165 A0A1W2PRG0 241 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 MINDY4BA8MYZ0 360 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 FOXP2O15409 715 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 HERVK_113P62684 666 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 SIAH1Q8IUQ4 282 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 GTF3C2Q8WUA4 911 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-208ENST00000589165 ZNF287Q9HBT7 754 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 MORF4L1Q9UBU8 362 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 CENPFP49454 3210 aa16.56■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L15C9J2P7 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L13C9JLJ4 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L11C9JVI0 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L18D6R9N7 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L22D6RA61 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L17D6RBQ6 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L19D6RCP7 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L20D6RJB6 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 VCAM1P19320 739 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 ICA1Q05084 483 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 USP17L24Q0WX57 530 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 ZYXQ15942 572 aaKnown RBP16.55■□□□□ 0.24
ERCC1-208ENST00000589165 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 NAPBQ9H115 298 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
ERCC1-208ENST00000589165 RASA1P20936 1047 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 CCDC129Q6ZRS4 1044 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 RILPL2Q969X0 211 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 FAM227BQ96M60 508 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 MKNK2Q9HBH9 465 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 ALX1Q15699 326 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 LPAR1Q92633 364 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.54■□□□□ 0.24
ERCC1-208ENST00000589165 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
ERCC1-208ENST00000589165 MYH8P13535 1937 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 MYPNQ86TC9 1320 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 TNPO2O14787 897 aaKnown RBP16.53■□□□□ 0.24
ERCC1-208ENST00000589165 SDSP20132 328 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 PDE4AP27815 886 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 PRKCZQ05513 592 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 PPARAQ07869 468 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 NMIQ13287 307 aaPredicted RBP16.53■□□□□ 0.24
ERCC1-208ENST00000589165 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 LBX2Q6XYB7 198 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 GPRC5AQ8NFJ5 357 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 ZNF333Q96JL9 665 aa16.53■□□□□ 0.24
ERCC1-208ENST00000589165 RPAP3Q9H6T3 665 aaPredicted RBP16.53■□□□□ 0.24
ERCC1-208ENST00000589165 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
ERCC1-208ENST00000589165 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.23
ERCC1-208ENST00000589165 SLC3A2P08195 630 aaKnown RBP16.52■□□□□ 0.23
ERCC1-208ENST00000589165 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.23
ERCC1-208ENST00000589165 SOX10P56693 466 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 PDE4BQ07343 736 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 VPS53Q5VIR6 699 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 RAET1EQ8TD07 263 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 COA7Q96BR5 231 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 VCPKMTQ9H867 229 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 TXNRD2Q9NNW7 524 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 RABGAP1Q9Y3P9 1069 aa16.52■□□□□ 0.23
ERCC1-208ENST00000589165 HIP1O00291 1037 aa16.51■□□□□ 0.23
ERCC1-208ENST00000589165 IRF5Q13568 498 aa16.51■□□□□ 0.23
ERCC1-208ENST00000589165 ZNF444Q8N0Y2 327 aaPredicted RBP16.51■□□□□ 0.23
ERCC1-208ENST00000589165 NYAP2Q9P242 653 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms