RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TRIM22Q8IYM9 498 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 MTMR14Q8NCE2 650 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 C8orf76Q96K31 380 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 SIPA1L1O43166 1804 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 NMT2O60551 498 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
CCBE1-203ENST00000589116 CXCL9Q07325 125 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
CCBE1-203ENST00000589116 RESTQ13127 1097 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 KAT14Q9H8E8 782 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 TMOD2Q9NZR1 351 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 FAM198AQ9UFP1 575 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 MYH6P13533 1939 aa14.03□□□□□ -0.16
CCBE1-203ENST00000589116 RPS12P25398 132 aaKnown RBP14.02□□□□□ -0.16
CCBE1-203ENST00000589116 CTCFP49711 727 aaPredicted RBP14.02□□□□□ -0.16
CCBE1-203ENST00000589116 KRT85P78386 507 aa14.02□□□□□ -0.16
CCBE1-203ENST00000589116 DLGAP5Q15398 846 aa14.02□□□□□ -0.16
CCBE1-203ENST00000589116 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.16
CCBE1-203ENST00000589116 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.16
CCBE1-203ENST00000589116 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.16
CCBE1-203ENST00000589116 PCDHAC2Q9Y5I4 1007 aa14.02□□□□□ -0.16
CCBE1-203ENST00000589116 GREB1LQ9C091 1923 aaPredicted RBP14.02□□□□□ -0.16
CCBE1-203ENST00000589116 DEXIO95424 95 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 KIF5BP33176 963 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 NOVP48745 357 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 MLLT1Q03111 559 aaPredicted RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 KLHL40Q2TBA0 621 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 CRACR2BQ8N4Y2 399 aaPredicted RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PHKBQ93100 1093 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PRMT6Q96LA8 375 aaPredicted RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 ALG1Q9BT22 464 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 SLC26A6Q9BXS9 759 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 TDRD3Q9H7E2 651 aaKnown RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PI4KBQ9UBF8 816 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 MBD3O95983 291 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 DNM1Q05193 864 aaKnown RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 FKBP1CQ5VVH2 108 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 ATL3Q6DD88 541 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 NBPF11Q86T75 865 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PNMA1Q8ND90 353 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 CHAMP1Q96JM3 812 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 CCDC17Q96LX7 622 aa14.01□□□□□ -0.17
CCBE1-203ENST00000589116 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
CCBE1-203ENST00000589116 PPFIA3O75145 1194 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 CACNB3P54284 484 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 RASSF7Q02833 373 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 FOXD4L6Q3SYB3 417 aaPredicted RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 FOXD4L3Q6VB84 417 aaPredicted RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 TMTC3Q6ZXV5 915 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 METTL16Q86W50 562 aaKnown RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 ABHD8Q96I13 439 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 STX8Q9UNK0 236 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 CNPY2Q9Y2B0 182 aa14□□□□□ -0.17
CCBE1-203ENST00000589116 DDX49Q9Y6V7 483 aaKnown RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 ZC3H4Q9UPT8 1303 aaKnown RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 DICER1Q9UPY3 1922 aaKnown RBP14□□□□□ -0.17
CCBE1-203ENST00000589116 FZD9O00144 591 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
CCBE1-203ENST00000589116 SHMT1P34896 483 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 GNAQP50148 359 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
CCBE1-203ENST00000589116 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
CCBE1-203ENST00000589116 FUT2Q10981 343 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 TCP10Q12799 353 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 TRIM29Q14134 588 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 GRM4Q14833 912 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 ZBED3Q96IU2 234 aaPredicted RBP13.99□□□□□ -0.17
CCBE1-203ENST00000589116 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
CCBE1-203ENST00000589116 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
CCBE1-203ENST00000589116 ELP1O95163 1332 aa13.99□□□□□ -0.17
CCBE1-203ENST00000589116 IGKV6D-41A0A0C4DH26 115 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 DDTLA6NHG4 134 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 PRPF3O43395 683 aaKnown RBP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 MYO1BO43795 1136 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 FOSBP53539 338 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 ZSCAN29Q8IWY8 852 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 ZFPM1Q8IX07 1006 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 CEP95Q96GE4 821 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 ZNF70Q9UC06 446 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 CFAP45Q9UL16 551 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 GLTPD2A6NH11 291 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 FIBPO43427 364 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms