RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 RPS26P11Q5JNZ5 115 aaPredicted RBP10.36□□□□□ -0.75
ATG4D-210ENST00000588972 PCNX4Q63HM2 1172 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 MKL1Q969V6 931 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 ABHD17AQ96GS6 310 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 SPACA7Q96KW9 195 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 QSER1Q2KHR3 1735 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 USP54Q70EL1 1684 aa10.35□□□□□ -0.75
ATG4D-210ENST00000588972 SOBPA7XYQ1 873 aa10.35□□□□□ -0.75
ATG4D-210ENST00000588972 PDE2AO00408 941 aaPredicted RBP10.35□□□□□ -0.75
ATG4D-210ENST00000588972 AXIN1O15169 862 aa10.35□□□□□ -0.75
ATG4D-210ENST00000588972 KLF4O43474 513 aa10.35□□□□□ -0.75
ATG4D-210ENST00000588972 RPS26P62854 115 aaKnown RBP10.35□□□□□ -0.75
ATG4D-210ENST00000588972 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
ATG4D-210ENST00000588972 TTC21BQ7Z4L5 1316 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 MON2Q7Z3U7 1717 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 ZBTB42B2RXF5 422 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 ANKRD13AQ8IZ07 590 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 CRIPAKQ8N1N5 446 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 TRPM4Q8TD43 1214 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 NKD1Q969G9 470 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 SIRPGQ9P1W8 387 aa10.34□□□□□ -0.75
ATG4D-210ENST00000588972 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.34□□□□□ -0.75
ATG4D-210ENST00000588972 COL24A1Q17RW2 1714 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 DGAT1O75907 488 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 SIK1P57059 783 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 GPLD1P80108 840 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 TCEAL1Q15170 157 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 CPLX3Q8WVH0 158 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 HNRNPLLQ8WVV9 542 aaKnown RBP10.33□□□□□ -0.76
ATG4D-210ENST00000588972 ANAPC16Q96DE5 110 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 PBX4Q9BYU1 374 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 RASSF4Q9H2L5 321 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 PRKAG3Q9UGI9 489 aa10.33□□□□□ -0.76
ATG4D-210ENST00000588972 GPN3Q9UHW5 284 aaPredicted RBP10.33□□□□□ -0.76
ATG4D-210ENST00000588972 ATXN7L1Q9ULK2 861 aaPredicted RBP10.33□□□□□ -0.76
ATG4D-210ENST00000588972 MRPL42Q9Y6G3 142 aaKnown RBP10.33□□□□□ -0.76
ATG4D-210ENST00000588972 LTN1O94822 1766 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 J3QW42 95 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 HSPA5P11021 654 aaKnown RBP10.32□□□□□ -0.76
ATG4D-210ENST00000588972 ATP11AP98196 1134 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 MLLT1Q03111 559 aaPredicted RBP10.32□□□□□ -0.76
ATG4D-210ENST00000588972 RAB33AQ14088 237 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 GPR162Q16538 588 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 ZNF827Q17R98 1081 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 TRIM42Q8IWZ5 723 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 ACSBG1Q96GR2 724 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 SHDQ96IW2 340 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 SRRTQ9BXP5 876 aaKnown RBP10.32□□□□□ -0.76
ATG4D-210ENST00000588972 TRIM55Q9BYV6 548 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 SHANK3Q9BYB0 1731 aa10.32□□□□□ -0.76
ATG4D-210ENST00000588972 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
ATG4D-210ENST00000588972 TUBGCP6Q96RT7 1819 aa10.31□□□□□ -0.76
ATG4D-210ENST00000588972 KTN1Q86UP2 1357 aaKnown RBP10.31□□□□□ -0.76
ATG4D-210ENST00000588972 F13A1P00488 732 aa10.31□□□□□ -0.76
ATG4D-210ENST00000588972 BNC2Q6ZN30 1099 aaPredicted RBP10.31□□□□□ -0.76
ATG4D-210ENST00000588972 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
ATG4D-210ENST00000588972 ZNF837Q96EG3 531 aaPredicted RBP10.31□□□□□ -0.76
ATG4D-210ENST00000588972 LRRC3Q9BY71 257 aa10.31□□□□□ -0.76
ATG4D-210ENST00000588972 MUC3BQ9H195 1237 aa10.31□□□□□ -0.76
ATG4D-210ENST00000588972 IL2RBP14784 551 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 POLD1P28340 1107 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 TMF1P82094 1093 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 RASIP1Q5U651 963 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 HFE2Q6ZVN8 426 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 CCDC84Q86UT8 332 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-210ENST00000588972 FBXO27Q8NI29 283 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 SLC16A10Q8TF71 515 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 SRPK1Q96SB4 655 aaKnown RBP10.3□□□□□ -0.76
ATG4D-210ENST00000588972 ATP13A2Q9NQ11 1180 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 TMEM39AQ9NV64 488 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 PPT2Q9UMR5 302 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 PCDHB5Q9Y5E4 795 aa10.3□□□□□ -0.76
ATG4D-210ENST00000588972 FAM208AQ9UK61 1670 aaKnown RBP10.3□□□□□ -0.76
ATG4D-210ENST00000588972 KAT6BQ8WYB5 2073 aa10.29□□□□□ -0.76
ATG4D-210ENST00000588972 TLR3O15455 904 aaKnown RBP10.29□□□□□ -0.76
ATG4D-210ENST00000588972 FGFR3P22607 806 aa10.29□□□□□ -0.76
ATG4D-210ENST00000588972 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
ATG4D-210ENST00000588972 GTPBP3Q969Y2 492 aaKnown RBP10.29□□□□□ -0.76
ATG4D-210ENST00000588972 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
ATG4D-210ENST00000588972 POP1Q99575 1024 aaKnown RBP10.29□□□□□ -0.76
ATG4D-210ENST00000588972 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
ATG4D-210ENST00000588972 LRRC4BQ9NT99 713 aa10.29□□□□□ -0.76
ATG4D-210ENST00000588972 A0A1W2PP64 1363 aa10.28□□□□□ -0.76
ATG4D-210ENST00000588972 U2SURPO15042 1029 aaKnown RBP10.28□□□□□ -0.76
ATG4D-210ENST00000588972 GATAD2BQ8WXI9 593 aa10.28□□□□□ -0.76
ATG4D-210ENST00000588972 CLEC4MQ9H2X3 399 aaPredicted RBP10.28□□□□□ -0.76
ATG4D-210ENST00000588972 DNAJB12Q9NXW2 375 aaKnown RBP10.28□□□□□ -0.76
ATG4D-210ENST00000588972 SNTG2Q9NY99 539 aa10.28□□□□□ -0.76
ATG4D-210ENST00000588972 PNPLA7Q6ZV29 1317 aa10.28□□□□□ -0.76
ATG4D-210ENST00000588972 DOT1LQ8TEK3 1739 aa10.27□□□□□ -0.76
ATG4D-210ENST00000588972 FAM221AA4D161 298 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 SMAD7O15105 426 aaKnown RBP10.27□□□□□ -0.77
ATG4D-210ENST00000588972 GHRHP01286 108 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms