RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 MYCNP04198 464 aaPredicted RBP9.55□□□□□ -0.88
NFIX-211ENST00000588680 LDHCP07864 332 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 CCNA1P78396 465 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 ATP2B2Q01814 1243 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 GRB14Q14449 540 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 SNX17Q15036 470 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 ANO1Q5XXA6 986 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 SLC39A5Q6ZMH5 540 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 MAPKAPK5Q8IW41 473 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 CRACR2BQ8N4Y2 399 aaPredicted RBP9.55□□□□□ -0.88
NFIX-211ENST00000588680 SPATA5Q8NB90 893 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 TRIM43Q96BQ3 446 aaPredicted RBP9.55□□□□□ -0.88
NFIX-211ENST00000588680 RNPC3Q96LT9 517 aaKnown RBP9.55□□□□□ -0.88
NFIX-211ENST00000588680 FEZ1Q99689 392 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 TRIM34Q9BYJ4 488 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 DHX36Q9H2U1 1008 aaKnown RBP9.55□□□□□ -0.88
NFIX-211ENST00000588680 RABGAP1Q9Y3P9 1069 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 IVNS1ABPQ9Y6Y0 642 aa9.55□□□□□ -0.88
NFIX-211ENST00000588680 MCM3APO60318 1980 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 HOXC6P09630 235 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 PTPREP23469 700 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 PLA2G5P39877 138 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 EPHB4P54760 987 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 TFCP2Q12800 502 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 GRIN2CQ14957 1233 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 NOL10Q9BSC4 688 aaKnown RBP9.54□□□□□ -0.88
NFIX-211ENST00000588680 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 GINM1Q9NU53 330 aa9.54□□□□□ -0.88
NFIX-211ENST00000588680 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
NFIX-211ENST00000588680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.54□□□□□ -0.88
NFIX-211ENST00000588680 REV3LO60673 3130 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 GH2P01242 217 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 IGHA2P01877 340 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 VCAM1P19320 739 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 DNAJB2P25686 324 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 ARID4AP29374 1257 aaPredicted RBP9.53□□□□□ -0.88
NFIX-211ENST00000588680 ADCYAP1R1P41586 468 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 MCAMP43121 646 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 METTL16Q86W50 562 aaKnown RBP9.53□□□□□ -0.88
NFIX-211ENST00000588680 ARRDC4Q8NCT1 418 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 TGFBRAP1Q8WUH2 860 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 FERMT2Q96AC1 680 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 C12orf42Q96LP6 360 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 BTBD7Q9P203 1132 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 SAP30BPQ9UHR5 308 aaKnown RBP9.53□□□□□ -0.88
NFIX-211ENST00000588680 PALD1Q9ULE6 856 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 AKAP2Q9Y2D5 859 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 ZNF521Q96K83 1311 aa9.53□□□□□ -0.88
NFIX-211ENST00000588680 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
NFIX-211ENST00000588680 TRANK1O15050 2925 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 PLCG2P16885 1265 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 ITGB8P26012 769 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 ADORA2AP29274 412 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 TLE2Q04725 743 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 LRRC41Q15345 812 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 FAM47AQ5JRC9 791 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 CATSPERGQ6ZRH7 1159 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 ADGRA1Q86SQ6 560 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 NEUROD6Q96NK8 337 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 LRP2BPQ9P2M1 347 aa9.52□□□□□ -0.89
NFIX-211ENST00000588680 PRRC2BQ5JSZ5 2229 aaKnown RBP9.52□□□□□ -0.89
NFIX-211ENST00000588680 SEPT4O43236 478 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 BAG3O95817 575 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 HLA-DOAP06340 250 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 CLTBP09497 229 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 GORABQ5T7V8 394 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 OLFML2BQ68BL8 750 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
NFIX-211ENST00000588680 LBX2Q6XYB7 198 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 DPP9Q86TI2 863 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
NFIX-211ENST00000588680 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 PPM1EQ8WY54 764 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 TIFAQ96CG3 184 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 FAM122AQ96E09 287 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 MEIS3Q99687 375 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 SMC4Q9NTJ3 1288 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 THEGQ9P2T0 379 aa9.51□□□□□ -0.89
NFIX-211ENST00000588680 SRGAP3O43295 1099 aa9.5□□□□□ -0.89
NFIX-211ENST00000588680 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
NFIX-211ENST00000588680 FPGSQ05932 587 aa9.5□□□□□ -0.89
NFIX-211ENST00000588680 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
NFIX-211ENST00000588680 ACER1Q8TDN7 264 aa9.5□□□□□ -0.89
NFIX-211ENST00000588680 MOV10L1Q9BXT6 1211 aaKnown RBP9.5□□□□□ -0.89
NFIX-211ENST00000588680 KIAA1683Q9H0B3 1180 aa9.5□□□□□ -0.89
NFIX-211ENST00000588680 ZNF576Q9H609 170 aa9.5□□□□□ -0.89
NFIX-211ENST00000588680 RPAP3Q9H6T3 665 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms