RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SART3Q15020 963 aaKnown RBP10.7□□□□□ -0.7
CIRBP-218ENST00000588344 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 RRP12Q5JTH9 1297 aaKnown RBP10.7□□□□□ -0.7
CIRBP-218ENST00000588344 TBC1D10CQ8IV04 446 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
CIRBP-218ENST00000588344 KCNB2Q92953 911 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 MKL1Q969V6 931 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 KIAA1683Q9H0B3 1180 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
CIRBP-218ENST00000588344 MTMR4Q9NYA4 1195 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 TMOD4Q9NZQ9 345 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 ZSWIM5Q9P217 1185 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 POLR2AP24928 1970 aaKnown RBP10.7□□□□□ -0.7
CIRBP-218ENST00000588344 MYH7P12883 1935 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 PLIN4Q96Q06 1357 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 IGKV6D-41A0A0C4DH26 115 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 A0A0G2JLL6 359 aaPredicted RBP10.69□□□□□ -0.7
CIRBP-218ENST00000588344 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 CA12O43570 354 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 PSMA5P28066 241 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 NOVP48745 357 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 JAG1P78504 1218 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 ICA1Q05084 483 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 GRM1Q13255 1194 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L2Q6R6M4 530 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 PRRT2Q7Z6L0 340 aaPredicted RBP10.69□□□□□ -0.7
CIRBP-218ENST00000588344 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 TMTC2Q8N394 836 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 LPAR1Q92633 364 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 MS4A4AQ96JQ5 239 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 FEZ1Q99689 392 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 UBAC1Q9BSL1 405 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
CIRBP-218ENST00000588344 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.69□□□□□ -0.7
CIRBP-218ENST00000588344 SLC45A1Q9Y2W3 748 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 TMX2Q9Y320 296 aa10.69□□□□□ -0.7
CIRBP-218ENST00000588344 ERICH2A1L162 156 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 EEF2P13639 858 aaKnown RBP10.68□□□□□ -0.7
CIRBP-218ENST00000588344 MCM5P33992 734 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 GJA5P36382 358 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 ANAPC15P60006 121 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 IL27Q8NEV9 243 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 CEP95Q96GE4 821 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 GOPCQ9HD26 462 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 INCENPQ9NQS7 918 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 CLIP2Q9UDT6 1046 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 TRPM7Q96QT4 1865 aa10.68□□□□□ -0.7
CIRBP-218ENST00000588344 CCL15-CCL14A0A0B4J2E2 113 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 B4E1Z4 1266 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 KDM4AO75164 1064 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 TOP1P11387 765 aaKnown RBP10.67□□□□□ -0.7
CIRBP-218ENST00000588344 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
CIRBP-218ENST00000588344 MTMR2Q13614 643 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 CCL15Q16663 113 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 C8orf34Q49A92 452 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 JMYQ8N9B5 988 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 TMEM87BQ96K49 555 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 C12orf42Q96LP6 360 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 ZSCAN10Q96SZ4 725 aaPredicted RBP10.67□□□□□ -0.7
CIRBP-218ENST00000588344 IL17RBQ9NRM6 502 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 PNMA3Q9UL41 463 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 STX8Q9UNK0 236 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 FOCADQ5VW36 1801 aa10.67□□□□□ -0.7
CIRBP-218ENST00000588344 NEDD4P46934 1319 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 WDR19Q8NEZ3 1342 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 AOC2O75106 756 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 OSBPP22059 807 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 HOXA7P31268 230 aaPredicted RBP10.66□□□□□ -0.7
CIRBP-218ENST00000588344 ATP2B2Q01814 1243 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 DHX32Q7L7V1 743 aaKnown RBP10.66□□□□□ -0.7
CIRBP-218ENST00000588344 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 GMCL1P1Q8NEA9 526 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 BRI3BPQ8WY22 251 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 TM6SF1Q9BZW5 370 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 VCPKMTQ9H867 229 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 SAGE1Q9NXZ1 904 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 AGTPBP1Q9UPW5 1226 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 TACC3Q9Y6A5 838 aa10.66□□□□□ -0.7
CIRBP-218ENST00000588344 DDX60LQ5H9U9 1706 aaKnown RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 A0A1W2PRG0 241 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L15C9J2P7 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L13C9JLJ4 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L11C9JVI0 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L18D6R9N7 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L22D6RA61 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L17D6RBQ6 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L19D6RCP7 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L20D6RJB6 530 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms