RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 TRMT44Q8IYL2 757 aaKnown RBP19.05■□□□□ 0.64
NCLN-203ENST00000587740 TGFBRAP1Q8WUH2 860 aa19.05■□□□□ 0.64
NCLN-203ENST00000587740 COL25A1Q9BXS0 654 aaPredicted RBP19.05■□□□□ 0.64
NCLN-203ENST00000587740 LRRCC1Q9C099 1032 aa19.05■□□□□ 0.64
NCLN-203ENST00000587740 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
NCLN-203ENST00000587740 LRP2BPQ9P2M1 347 aa19.05■□□□□ 0.64
NCLN-203ENST00000587740 FLT1P17948 1338 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 RGS2P41220 211 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 PPP4CP60510 307 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 PLEKHH3Q7Z736 793 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 AACSQ86V21 672 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 EAF2Q96CJ1 260 aaPredicted RBP19.04■□□□□ 0.64
NCLN-203ENST00000587740 GUCD1Q96NT3 240 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 DBNDD2Q9BQY9 259 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 PAGR1Q9BTK6 254 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 CCDC8Q9H0W5 538 aaPredicted RBP19.04■□□□□ 0.64
NCLN-203ENST00000587740 RWDD1Q9H446 243 aaPredicted RBP19.04■□□□□ 0.64
NCLN-203ENST00000587740 PALD1Q9ULE6 856 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 FRMPD3Q5JV73 1810 aa19.04■□□□□ 0.64
NCLN-203ENST00000587740 EYSQ5T1H1 3165 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
NCLN-203ENST00000587740 FOCADQ5VW36 1801 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 CNMDO75829 334 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 TTC39AQ5SRH9 613 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 NAA16Q6N069 864 aaPredicted RBP19.03■□□□□ 0.64
NCLN-203ENST00000587740 FOXP4Q8IVH2 680 aaPredicted RBP19.03■□□□□ 0.64
NCLN-203ENST00000587740 APBA2Q99767 749 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 SNRKQ9NRH2 765 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 FLRT1Q9NZU1 646 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 VCANP13611 3396 aa19.03■□□□□ 0.64
NCLN-203ENST00000587740 UQCRFS1P1P0C7P4 283 aa19.02■□□□□ 0.64
NCLN-203ENST00000587740 GINM1Q9NU53 330 aa19.02■□□□□ 0.64
NCLN-203ENST00000587740 DBNLQ9UJU6 430 aaKnown RBP19.02■□□□□ 0.64
NCLN-203ENST00000587740 PRUNE2Q8WUY3 3088 aa19.02■□□□□ 0.63
NCLN-203ENST00000587740 BAG3O95817 575 aa19.01■□□□□ 0.63
NCLN-203ENST00000587740 IFIT2P09913 472 aaKnown RBP19.01■□□□□ 0.63
NCLN-203ENST00000587740 MAP2K5Q13163 448 aa19.01■□□□□ 0.63
NCLN-203ENST00000587740 GTF3C2Q8WUA4 911 aaPredicted RBP19.01■□□□□ 0.63
NCLN-203ENST00000587740 NOL10Q9BSC4 688 aaKnown RBP19.01■□□□□ 0.63
NCLN-203ENST00000587740 TLR7Q9NYK1 1049 aaKnown RBP19.01■□□□□ 0.63
NCLN-203ENST00000587740 NDUFB9Q9Y6M9 179 aa19.01■□□□□ 0.63
NCLN-203ENST00000587740 SMARCA5O60264 1052 aaPredicted RBP19■□□□□ 0.63
NCLN-203ENST00000587740 CYP2E1P05181 493 aaPredicted RBP19■□□□□ 0.63
NCLN-203ENST00000587740 PLCG2P16885 1265 aa19■□□□□ 0.63
NCLN-203ENST00000587740 FAM109BQ6ICB4 259 aaPredicted RBP19■□□□□ 0.63
NCLN-203ENST00000587740 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
NCLN-203ENST00000587740 PHF6Q8IWS0 365 aaKnown RBP eCLIP19■□□□□ 0.63
NCLN-203ENST00000587740 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
NCLN-203ENST00000587740 CRACR2BQ8N4Y2 399 aaPredicted RBP19■□□□□ 0.63
NCLN-203ENST00000587740 EDC3Q96F86 508 aaKnown RBP19■□□□□ 0.63
NCLN-203ENST00000587740 SENP6Q9GZR1 1112 aaPredicted RBP19■□□□□ 0.63
NCLN-203ENST00000587740 ZBTB47Q9UFB7 747 aaPredicted RBP19■□□□□ 0.63
NCLN-203ENST00000587740 SAP30BPQ9UHR5 308 aaKnown RBP19■□□□□ 0.63
NCLN-203ENST00000587740 MAST2Q6P0Q8 1798 aa19■□□□□ 0.63
NCLN-203ENST00000587740 GH2P01242 217 aa18.99■□□□□ 0.63
NCLN-203ENST00000587740 C12orf42Q96LP6 360 aa18.99■□□□□ 0.63
NCLN-203ENST00000587740 FAM161BQ96MY7 647 aa18.99■□□□□ 0.63
NCLN-203ENST00000587740 RABGAP1Q9Y3P9 1069 aa18.99■□□□□ 0.63
NCLN-203ENST00000587740 NEFLP07196 543 aa18.98■□□□□ 0.63
NCLN-203ENST00000587740 DYNLL1P63167 89 aaKnown RBP18.98■□□□□ 0.63
NCLN-203ENST00000587740 TRIM34Q9BYJ4 488 aa18.98■□□□□ 0.63
NCLN-203ENST00000587740 IGHA2P01877 340 aa18.97■□□□□ 0.63
NCLN-203ENST00000587740 PTPREP23469 700 aa18.97■□□□□ 0.63
NCLN-203ENST00000587740 ATN1P54259 1190 aaPredicted RBP18.97■□□□□ 0.63
NCLN-203ENST00000587740 ZYXQ15942 572 aaKnown RBP18.97■□□□□ 0.63
NCLN-203ENST00000587740 TRPV1Q8NER1 839 aa18.97■□□□□ 0.63
NCLN-203ENST00000587740 NPLOC4Q8TAT6 608 aa18.97■□□□□ 0.63
NCLN-203ENST00000587740 ZNF512BQ96KM6 892 aaPredicted RBP18.97■□□□□ 0.63
NCLN-203ENST00000587740 PIH1D3Q9NQM4 214 aaKnown RBP18.97■□□□□ 0.63
NCLN-203ENST00000587740 DDX20Q9UHI6 824 aaKnown RBP18.97■□□□□ 0.63
NCLN-203ENST00000587740 MYH1P12882 1939 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 SLC15A5A6NIM6 579 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L17D6RBQ6 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L19D6RCP7 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L20D6RJB6 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 IGHDP01880 384 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 ZAP70P43403 619 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 USP17L24Q0WX57 530 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 MFSD14CQ5VZR4 134 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 TATDN1Q6P1N9 297 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 CATSPERGQ6ZRH7 1159 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 ACER1Q8TDN7 264 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 LPAR1Q92633 364 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 BTBD7Q9P203 1132 aa18.96■□□□□ 0.63
NCLN-203ENST00000587740 LTBP2Q14767 1821 aa18.95■□□□□ 0.62
NCLN-203ENST00000587740 HLA-DOAP06340 250 aa18.95■□□□□ 0.62
NCLN-203ENST00000587740 HOXC6P09630 235 aa18.95■□□□□ 0.62
NCLN-203ENST00000587740 CYP2C19P33261 490 aa18.95■□□□□ 0.62
NCLN-203ENST00000587740 LBHD1Q9BQE6 289 aaPredicted RBP18.95■□□□□ 0.62
NCLN-203ENST00000587740 CWC22Q9HCG8 908 aaKnown RBP18.95■□□□□ 0.62
NCLN-203ENST00000587740 SPTBN5Q9NRC6 3674 aaKnown RBP18.95■□□□□ 0.62
NCLN-203ENST00000587740 RLFQ13129 1914 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms