RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 NFXL1Q6ZNB6 911 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 SCYL3Q8IZE3 742 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 MKL1Q969V6 931 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 WRNIP1Q96S55 665 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 LY9Q9HBG7 655 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 PICK1Q9NRD5 415 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 DAXXQ9UER7 740 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 CSADQ9Y600 493 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 SLC12A7Q9Y666 1083 aa12.12□□□□□ -0.47
CLPTM1-207ENST00000587537 SSC5DA1L4H1 1573 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 NID2Q14112 1375 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 TOMM70O94826 608 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 AKR1B1P15121 316 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 KIF5BP33176 963 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 ICA1Q05084 483 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 FSTL1Q12841 308 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 C2orf69Q8N8R5 385 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 BRF1Q92994 677 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 CEP95Q96GE4 821 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
CLPTM1-207ENST00000587537 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 ZBTB43O43298 467 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 CDKL5O76039 1030 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 GH2P01242 217 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 YY1P25490 414 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 GNAQP50148 359 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 USP14P54578 494 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 APOA5Q6Q788 366 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 GOPCQ9HD26 462 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 IL17RBQ9NRM6 502 aa12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-207ENST00000587537 KLF18A0A0U1RQI7 1052 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 KIF3CO14782 793 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 GDF11O95390 407 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 CPA1P15085 419 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 EVX2Q03828 476 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 PNMA1Q8ND90 353 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 LPAR1Q92633 364 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 LLPHQ9BRT6 129 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 SLKQ9H2G2 1235 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 GBA2Q9HCG7 927 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-207ENST00000587537 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 GOLGA8BA8MQT2 603 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 C19orf81C9J6K1 198 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 PFKFB2O60825 505 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 PPATQ06203 517 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 SEPT2Q15019 361 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 GPATCH4Q5T3I0 446 aaKnown RBP12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 LDLRAD1Q5T700 205 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 CHST3Q7LGC8 479 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 ERO1BQ86YB8 467 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 DCAF4Q8WV16 495 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 KIAA1683Q9H0B3 1180 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
CLPTM1-207ENST00000587537 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms