RNA–Protein interactions for RNA: ENST00000586911.1

HIGD1B-202, Transcript of HIG1 hypoxia inducible domain family member 1B, humanhuman

TSL 3

Gene HIGD1B, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1B-202ENST00000586911 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 HERVK_113P62684 666 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 LRIT3Q3SXY7 679 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 TDHQ8IZJ6 230 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 SOCS4Q8WXH5 440 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 HMX1Q9NP08 348 aaPredicted RBP12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 MTMR10Q9NXD2 777 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 OGDHLQ9ULD0 1010 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 PRUNE2Q8WUY3 3088 aa12.16□□□□□ -0.46
HIGD1B-202ENST00000586911 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 GH2P01242 217 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 PDE6AP16499 860 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 USP14P54578 494 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 SLC9C2Q5TAH2 1124 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 CRNKL1Q9BZJ0 848 aaKnown RBP12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 STXBP5LQ9Y2K9 1186 aa12.15□□□□□ -0.46
HIGD1B-202ENST00000586911 GOLIM4O00461 696 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 JAG1P78504 1218 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 RAB3GAP1Q15042 981 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 C12orf42Q96LP6 360 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 TXNRD2Q9NNW7 524 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 CABP5Q9NP86 173 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
HIGD1B-202ENST00000586911 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 MAPK4P31152 587 aa12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 P2RX7Q99572 595 aaKnown RBP12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 PAGR1Q9BTK6 254 aa12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
HIGD1B-202ENST00000586911 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 FRMPD3Q5JV73 1810 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 BAZ2AQ9UIF9 1905 aaKnown RBP12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 COL6A1P12109 1028 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 ERVK-24P63145 666 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 CCNA1P78396 465 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 CACNB2Q08289 660 aaPredicted RBP12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 CCL14Q16627 93 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 LRRC26Q2I0M4 334 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 Q3C1V9 767 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 AMOTL1Q8IY63 956 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 COL25A1Q9BXS0 654 aaPredicted RBP12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 SPTBN5Q9NRC6 3674 aaKnown RBP12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
HIGD1B-202ENST00000586911 ZNF236Q9UL36 1845 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 ZKSCAN1P17029 563 aaPredicted RBP12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 VCAM1P19320 739 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 CCND3P30281 292 aaPredicted RBP12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 SHMT1P34896 483 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 RGS2P41220 211 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 LHX8Q68G74 356 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 LCORLQ8N3X6 602 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 DDRGK1Q96HY6 314 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 APBA2Q99767 749 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 PORCNQ9H237 461 aa12.11□□□□□ -0.47
HIGD1B-202ENST00000586911 TCRBV5S4A2TA0A5A2 114 aa12.1□□□□□ -0.47
HIGD1B-202ENST00000586911 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
HIGD1B-202ENST00000586911 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
HIGD1B-202ENST00000586911 XRCC5P13010 732 aaKnown RBP12.1□□□□□ -0.47
HIGD1B-202ENST00000586911 ATP5JP18859 108 aa12.1□□□□□ -0.47
HIGD1B-202ENST00000586911 PLCD1P51178 756 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms