RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 TRPM4Q8TD43 1214 aa9.95□□□□□ -0.82
NPC1-204ENST00000586718 L3MBTL3Q96JM7 780 aaPredicted RBP9.95□□□□□ -0.82
NPC1-204ENST00000586718 TMEM39BQ9GZU3 492 aa9.95□□□□□ -0.82
NPC1-204ENST00000586718 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.95□□□□□ -0.82
NPC1-204ENST00000586718 NCOA5Q9HCD5 579 aaKnown RBP9.95□□□□□ -0.82
NPC1-204ENST00000586718 GGA3Q9NZ52 723 aa9.95□□□□□ -0.82
NPC1-204ENST00000586718 STK36Q9NRP7 1315 aa9.95□□□□□ -0.82
NPC1-204ENST00000586718 NMT2O60551 498 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 TTLL1O95922 423 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 RXRAP19793 462 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 DDIT3P35638 169 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 AKAP17AQ02040 695 aaKnown RBP9.94□□□□□ -0.82
NPC1-204ENST00000586718 ST3GAL1Q11201 340 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 ABCB5Q2M3G0 1257 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 ANGEL2Q5VTE6 544 aaKnown RBP9.94□□□□□ -0.82
NPC1-204ENST00000586718 DCAF15Q66K64 600 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 METTL16Q86W50 562 aaKnown RBP9.94□□□□□ -0.82
NPC1-204ENST00000586718 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 WASF1Q92558 559 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 CEP95Q96GE4 821 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 MAP3K14Q99558 947 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 MYL10Q9BUA6 226 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 DNAJC18Q9H819 358 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 HPS5Q9UPZ3 1129 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
NPC1-204ENST00000586718 VPS37CA5D8V6 355 aaPredicted RBP9.93□□□□□ -0.82
NPC1-204ENST00000586718 GLTPD2A6NH11 291 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 FAM196BA6NMK8 535 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 H3BQV1 296 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 TBC1D12O60347 775 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 JAK2O60674 1132 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 GDF11O95390 407 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 EGFRP00533 1210 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 EPS15P42566 896 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 GNAQP50148 359 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 ATP2B2Q01814 1243 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 ICA1Q05084 483 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 RAB3GAP1Q15042 981 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 TATDN1Q6P1N9 297 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 USP50Q70EL3 339 aaPredicted RBP9.93□□□□□ -0.82
NPC1-204ENST00000586718 FANCBQ8NB91 859 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 ANKS1AQ92625 1134 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 DDX11Q96FC9 970 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 GBP4Q96PP9 640 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 DEFB129Q9H1M3 183 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
NPC1-204ENST00000586718 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
NPC1-204ENST00000586718 MYH15Q9Y2K3 1946 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 IGKV6D-41A0A0C4DH26 115 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 STX6O43752 255 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 IFNAR1P17181 557 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
NPC1-204ENST00000586718 TROAPQ12815 778 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 TRIM29Q14134 588 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 LARP1BQ659C4 914 aaKnown RBP9.92□□□□□ -0.82
NPC1-204ENST00000586718 RCSD1Q6JBY9 416 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 SULF1Q8IWU6 871 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 DCPSQ96C86 337 aaKnown RBP9.92□□□□□ -0.82
NPC1-204ENST00000586718 TMEM47Q9BQJ4 181 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 LZTS2Q9BRK4 669 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 ZNF341Q9BYN7 854 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 KANSL2Q9H9L4 492 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 IL17RBQ9NRM6 502 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 GINM1Q9NU53 330 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 MTMR4Q9NYA4 1195 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 ORC3Q9UBD5 711 aaPredicted RBP9.92□□□□□ -0.82
NPC1-204ENST00000586718 ZBTB21Q9ULJ3 1066 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 ATP6V1DQ9Y5K8 247 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 UTRNP46939 3433 aa9.92□□□□□ -0.82
NPC1-204ENST00000586718 ASTN2O75129 1339 aaPredicted RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 GOLGA6L22H0YM25 854 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 DEXIO95424 95 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 FMNL1O95466 1100 aaPredicted RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 GH2P01242 217 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 ASNSP08243 561 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 PARP1P09874 1014 aaKnown RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 XBP1P17861 261 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 SYT1P21579 422 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 EPHX2P34913 555 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 GRM4Q14833 912 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 SUPT20HL1Q3ZLR7 823 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 ASPRV1Q53RT3 343 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 TMTC3Q6ZXV5 915 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 PNMA8AQ86V59 439 aaPredicted RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 LRRC47Q8N1G4 583 aaKnown RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 SLC26A6Q9BXS9 759 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 RNF26Q9BY78 433 aaPredicted RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 ISY1Q9ULR0 285 aaKnown RBP9.91□□□□□ -0.82
NPC1-204ENST00000586718 SYNPO2Q9UMS6 1093 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
NPC1-204ENST00000586718 CNTNAP5Q8WYK1 1306 aa9.9□□□□□ -0.82
NPC1-204ENST00000586718 CTDNEP1O95476 244 aa9.9□□□□□ -0.82
NPC1-204ENST00000586718 BRD1O95696 1058 aa9.9□□□□□ -0.82
NPC1-204ENST00000586718 ZSCAN22P10073 491 aaPredicted RBP9.9□□□□□ -0.82
NPC1-204ENST00000586718 CDC27P30260 824 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms