RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
VMP1-203ENST00000586245 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 CCDC84Q86UT8 332 aaPredicted RBP16.04■□□□□ 0.16
VMP1-203ENST00000586245 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.04■□□□□ 0.16
VMP1-203ENST00000586245 TM6SF1Q9BZW5 370 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 MTMR4Q9NYA4 1195 aa16.04■□□□□ 0.16
VMP1-203ENST00000586245 IFIT3O14879 490 aaKnown RBP16.03■□□□□ 0.16
VMP1-203ENST00000586245 PRC1O43663 620 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 TTLL1O95922 423 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
VMP1-203ENST00000586245 PPIL2Q13356 520 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 DEFB115Q30KQ5 88 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
VMP1-203ENST00000586245 RASAL3Q86YV0 1011 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 CCDC102AQ96A19 550 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 WNK4Q96J92 1243 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 ZSCAN10Q96SZ4 725 aaPredicted RBP16.03■□□□□ 0.16
VMP1-203ENST00000586245 FEZ1Q99689 392 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 WDR18Q9BV38 432 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 SH2D4AQ9H788 454 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 NYAP2Q9P242 653 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 CLIP2Q9UDT6 1046 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 STX8Q9UNK0 236 aa16.03■□□□□ 0.16
VMP1-203ENST00000586245 TNKSO95271 1327 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 NMT2O60551 498 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 ZBTB48P10074 688 aaPredicted RBP16.02■□□□□ 0.16
VMP1-203ENST00000586245 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.16
VMP1-203ENST00000586245 HSPA6P17066 643 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 SPRYD7Q5W111 196 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 CHST3Q7LGC8 479 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 TMEM87BQ96K49 555 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 TTC14Q96N46 770 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 MTA3Q9BTC8 594 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.16
VMP1-203ENST00000586245 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 TRIM75PA6NK02 468 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 USP17L10C9JJH3 530 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 CXCL11O14625 94 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 SLC10A3P09131 477 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 RPS6KB1P23443 525 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 ECE1P42892 770 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 ANTXR2P58335 489 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 FGD1P98174 961 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 SPP2Q13103 211 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 GRM1Q13255 1194 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 DGKHQ86XP1 1220 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 ZSWIM6Q9HCJ5 1215 aa16.01■□□□□ 0.15
VMP1-203ENST00000586245 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
VMP1-203ENST00000586245 C19orf81C9J6K1 198 aa16■□□□□ 0.15
VMP1-203ENST00000586245 IRF6O14896 467 aa16■□□□□ 0.15
VMP1-203ENST00000586245 TOP1P11387 765 aaKnown RBP16■□□□□ 0.15
VMP1-203ENST00000586245 CPA1P15085 419 aa16■□□□□ 0.15
VMP1-203ENST00000586245 GJA5P36382 358 aa16■□□□□ 0.15
VMP1-203ENST00000586245 USP14P54578 494 aa16■□□□□ 0.15
VMP1-203ENST00000586245 MKRN3Q13064 507 aaKnown RBP16■□□□□ 0.15
VMP1-203ENST00000586245 SNAPC2Q13487 334 aa16■□□□□ 0.15
VMP1-203ENST00000586245 WTAPQ15007 396 aa16■□□□□ 0.15
VMP1-203ENST00000586245 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
VMP1-203ENST00000586245 CYP4F22Q6NT55 531 aa16■□□□□ 0.15
VMP1-203ENST00000586245 ENAHQ8N8S7 591 aaPredicted RBP16■□□□□ 0.15
VMP1-203ENST00000586245 ACER1Q8TDN7 264 aa16■□□□□ 0.15
VMP1-203ENST00000586245 MKL1Q969V6 931 aa16■□□□□ 0.15
VMP1-203ENST00000586245 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
VMP1-203ENST00000586245 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
VMP1-203ENST00000586245 TMX2Q9Y320 296 aa16■□□□□ 0.15
VMP1-203ENST00000586245 A0A1W2PRG0 241 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 NOVP48745 357 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 GTF2A2P52657 109 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 BACE1P56817 501 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 HTRA3P83110 453 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 EXOSC10Q01780 885 aaKnown RBP15.99■□□□□ 0.15
VMP1-203ENST00000586245 MTMR2Q13614 643 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
VMP1-203ENST00000586245 ZYXQ15942 572 aaKnown RBP15.99■□□□□ 0.15
VMP1-203ENST00000586245 SIAH1Q8IUQ4 282 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 CAPNS2Q96L46 248 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 LRRC2Q9BYS8 371 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 KIAA1683Q9H0B3 1180 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 GOPCQ9HD26 462 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 TMOD4Q9NZQ9 345 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 SYNPO2Q9UMS6 1093 aa15.99■□□□□ 0.15
VMP1-203ENST00000586245 SH2B2O14492 632 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms