RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 ANKRD65E5RJM6 399 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 SMARCA5O60264 1052 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 OATP04181 439 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 FESP07332 822 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 EVCP57679 992 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 CCZ1BP86790 482 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 CCZ1P86791 482 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 IQCB1Q15051 598 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 LDHDQ86WU2 507 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 TSPYL6Q8N831 410 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 MIPOL1Q8TD10 442 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 EZH1Q92800 747 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 OSBPL9Q96SU4 736 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 CWC25Q9NXE8 425 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 PSME4Q14997 1843 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 ELL2O00472 640 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 ERLIN1O75477 346 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 ETF1P62495 437 aaKnown RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 PNMA8AQ86V59 439 aaPredicted RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
ZNF540-203ENST00000586134 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 RGL1Q9NZL6 768 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
ZNF540-203ENST00000586134 RBM47A0AV96 593 aaKnown RBP11.27□□□□□ -0.61
ZNF540-203ENST00000586134 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 TUBBP07437 444 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 FNTAP49354 379 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 TMED1Q13445 227 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 LAMB3Q13751 1172 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 ZBTB10Q96DT7 871 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 UBA5Q9GZZ9 404 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
ZNF540-203ENST00000586134 RTL9Q8NET4 1388 aa11.27□□□□□ -0.61
ZNF540-203ENST00000586134 PDLIM1O00151 329 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 TPD52L2O43399 206 aaKnown RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 ARHGAP25P42331 645 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 USP5P45974 858 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 NEXNQ0ZGT2 675 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 DBN1Q16643 649 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 CCDC144BQ3MJ40 725 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 LRRN4CLQ8ND94 238 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 FAM81AQ8TBF8 368 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 C17orf50Q8WW18 174 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 RSRC1Q96IZ7 334 aaKnown RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 MYD88Q99836 296 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 PDE11AQ9HCR9 933 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 FAN1Q9Y2M0 1017 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 CEP350Q5VT06 3117 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 PDE8AO60658 829 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 SHOX2O60902 331 aaPredicted RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 TPP2P29144 1249 aaPredicted RBP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 SLC8A1P32418 973 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 SMTNP53814 917 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 TYRO3Q06418 890 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 G3BP1Q13283 466 aaKnown RBP eCLIP11.26□□□□□ -0.61
ZNF540-203ENST00000586134 SLMAPQ14BN4 828 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 B4GALNT4Q76KP1 1039 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 SPDL1Q96EA4 605 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 HOOK2Q96ED9 719 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 PPP1R13BQ96KQ4 1090 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 CBX8Q9HC52 389 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 IMPACTQ9P2X3 320 aa11.26□□□□□ -0.61
ZNF540-203ENST00000586134 TRPM7Q96QT4 1865 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 PI4KAP2A4QPH2 592 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 OPA1O60313 960 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 VAMP4O75379 141 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 PYGLP06737 847 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 SNX1Q13596 522 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 CEP85LQ5SZL2 805 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 TRIM42Q8IWZ5 723 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 PI4KAP1Q8N8J0 262 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 PARD6BQ9BYG5 372 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 CD248Q9HCU0 757 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms