RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
MBD3-203ENST00000585903 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 MORN1Q5T089 497 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 AACSQ86V21 672 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
MBD3-203ENST00000585903 RHPN1Q8TCX5 695 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
MBD3-203ENST00000585903 TXNRD2Q9NNW7 524 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 ZNF236Q9UL36 1845 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 GDF11O95390 407 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 BMP8BP34820 402 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 RGS2P41220 211 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 GABPAQ06546 454 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 CERKLQ49MI3 558 aaPredicted RBP12.84□□□□□ -0.35
MBD3-203ENST00000585903 TRIB2Q92519 343 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
MBD3-203ENST00000585903 APBA2Q99767 749 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
MBD3-203ENST00000585903 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 CABP5Q9NP86 173 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
MBD3-203ENST00000585903 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
MBD3-203ENST00000585903 MYH8P13535 1937 aa12.84□□□□□ -0.35
MBD3-203ENST00000585903 HOXC6P09630 235 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 ZKSCAN1P17029 563 aaPredicted RBP12.83□□□□□ -0.36
MBD3-203ENST00000585903 ABCB5Q2M3G0 1257 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 GPR142Q7Z601 462 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 PLEKHH3Q7Z736 793 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
MBD3-203ENST00000585903 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.36
MBD3-203ENST00000585903 MYH7P12883 1935 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 SLC15A5A6NIM6 579 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
MBD3-203ENST00000585903 SHMT1P34896 483 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 SLC9C2Q5TAH2 1124 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 FEZ1Q99689 392 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 ANTXR1Q9H6X2 564 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 ZBTB40Q9NUA8 1239 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 SWAP70Q9UH65 585 aa12.82□□□□□ -0.36
MBD3-203ENST00000585903 SPTBN5Q9NRC6 3674 aaKnown RBP12.82□□□□□ -0.36
MBD3-203ENST00000585903 FRMPD3Q5JV73 1810 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 VCANP13611 3396 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 TCRBV5S4A2TA0A5A2 114 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 MSCO60682 206 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 PDE6AP16499 860 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 VCAM1P19320 739 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 CYP2B6P20813 491 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 Q3C1V9 767 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 MB21D1Q8N884 522 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 LPAR1Q92633 364 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 PORCNQ9H237 461 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 C11orf49Q9H6J7 331 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 ATP8A2Q9NTI2 1148 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 HOXC10Q9NYD6 342 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
MBD3-203ENST00000585903 RLFQ13129 1914 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 STRNO43815 780 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 CNMDO75829 334 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 IGHA2P01877 340 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
MBD3-203ENST00000585903 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
MBD3-203ENST00000585903 COL6A1P12109 1028 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 PLCD1P51178 756 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 CACNB2Q08289 660 aaPredicted RBP12.8□□□□□ -0.36
MBD3-203ENST00000585903 RAB3GAP1Q15042 981 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 SHROOM1Q2M3G4 852 aaPredicted RBP12.8□□□□□ -0.36
MBD3-203ENST00000585903 TMEM179Q6ZVK1 233 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 SHCBP1Q8NEM2 672 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 GDF15Q99988 308 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 COL25A1Q9BXS0 654 aaPredicted RBP12.8□□□□□ -0.36
MBD3-203ENST00000585903 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
MBD3-203ENST00000585903 DCP1AQ9NPI6 582 aaPredicted RBP12.8□□□□□ -0.36
MBD3-203ENST00000585903 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 COG6Q9Y2V7 657 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 DNAH12Q6ZR08 3092 aa12.8□□□□□ -0.36
MBD3-203ENST00000585903 ATP5JP18859 108 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 PTPREP23469 700 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 GUCY1A2P33402 732 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 TRIM32Q13049 653 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 GRB14Q14449 540 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 MFSD14CQ5VZR4 134 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 LHX8Q68G74 356 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 DIS3LQ8TF46 1054 aaKnown RBP12.79□□□□□ -0.36
MBD3-203ENST00000585903 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
MBD3-203ENST00000585903 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 PAGR1Q9BTK6 254 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
MBD3-203ENST00000585903 MCM9Q9NXL9 1143 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms