RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 FPGT-TNNI3KV9GXZ4 949 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
SDF2-203ENST00000585749 ATAD5Q96QE3 1844 aa11.33□□□□□ -0.6
SDF2-203ENST00000585749 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
SDF2-203ENST00000585749 ENTPD3O75355 529 aa11.33□□□□□ -0.6
SDF2-203ENST00000585749 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
SDF2-203ENST00000585749 CACNB2Q08289 660 aaPredicted RBP11.33□□□□□ -0.6
SDF2-203ENST00000585749 GORABQ5T7V8 394 aa11.33□□□□□ -0.6
SDF2-203ENST00000585749 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
SDF2-203ENST00000585749 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
SDF2-203ENST00000585749 TTYH1Q9H313 450 aaPredicted RBP11.33□□□□□ -0.6
SDF2-203ENST00000585749 MORF4L1Q9UBU8 362 aa11.33□□□□□ -0.6
SDF2-203ENST00000585749 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
SDF2-203ENST00000585749 HMMRO75330 724 aa11.32□□□□□ -0.6
SDF2-203ENST00000585749 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
SDF2-203ENST00000585749 XRCC5P13010 732 aaKnown RBP11.32□□□□□ -0.6
SDF2-203ENST00000585749 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
SDF2-203ENST00000585749 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
SDF2-203ENST00000585749 C20orf194Q5TEA3 1177 aa11.32□□□□□ -0.6
SDF2-203ENST00000585749 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
SDF2-203ENST00000585749 ASCC2Q9H1I8 757 aaPredicted RBP11.32□□□□□ -0.6
SDF2-203ENST00000585749 TNFRSF10AO00220 468 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 FOSL2P15408 326 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 HMGCS2P54868 508 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 PABPC4Q13310 644 aaKnown RBP eCLIP11.31□□□□□ -0.65e-6■□□□□ 10.8
SDF2-203ENST00000585749 C9orf50Q5SZB4 431 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
SDF2-203ENST00000585749 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
SDF2-203ENST00000585749 SPATA5Q8NB90 893 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 SOCS4Q8WXH5 440 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 ZNF512BQ96KM6 892 aaPredicted RBP11.31□□□□□ -0.6
SDF2-203ENST00000585749 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 DDX4Q9NQI0 724 aaKnown RBP11.31□□□□□ -0.6
SDF2-203ENST00000585749 HMG20BQ9P0W2 317 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 EXOC6BQ9Y2D4 811 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 GAKO14976 1311 aa11.31□□□□□ -0.6
SDF2-203ENST00000585749 PEX10O60683 326 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 ZKSCAN1P17029 563 aaPredicted RBP11.3□□□□□ -0.6
SDF2-203ENST00000585749 PLA2G5P39877 138 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 MCAMP43121 646 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 SPP2Q13103 211 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 SHHQ15465 462 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 CCL14Q16627 93 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 CCDC158Q5M9N0 1113 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 TTC39AQ5SRH9 613 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
SDF2-203ENST00000585749 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 TRMT44Q8IYL2 757 aaKnown RBP11.3□□□□□ -0.6
SDF2-203ENST00000585749 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 USP6NLQ92738 828 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
SDF2-203ENST00000585749 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
SDF2-203ENST00000585749 DBNLQ9UJU6 430 aaKnown RBP11.3□□□□□ -0.6
SDF2-203ENST00000585749 TBC1D12O60347 775 aa11.29□□□□□ -0.6
SDF2-203ENST00000585749 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
SDF2-203ENST00000585749 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
SDF2-203ENST00000585749 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
SDF2-203ENST00000585749 EAF2Q96CJ1 260 aaPredicted RBP11.29□□□□□ -0.6
SDF2-203ENST00000585749 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
SDF2-203ENST00000585749 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
SDF2-203ENST00000585749 RLFQ13129 1914 aa11.29□□□□□ -0.6
SDF2-203ENST00000585749 FAM196BA6NMK8 535 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 SNPHO15079 494 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 IGSF3O75054 1194 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 RRP1P56182 461 aaKnown RBP11.28□□□□□ -0.6
SDF2-203ENST00000585749 MECOMQ03112 1051 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 PICALMQ13492 652 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
SDF2-203ENST00000585749 RYDENQ9NUL5 291 aaKnown RBP11.28□□□□□ -0.6
SDF2-203ENST00000585749 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
SDF2-203ENST00000585749 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
SDF2-203ENST00000585749 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.6
SDF2-203ENST00000585749 ST18O60284 1047 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 RAB11FIP3O75154 756 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 MAPK4P31152 587 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 RGS2P41220 211 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 RTP1P59025 263 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 GSTO1P78417 241 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.61
SDF2-203ENST00000585749 MORN1Q5T089 497 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 AACSQ86V21 672 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 GPRC5AQ8NFJ5 357 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 ZNF384Q8TF68 577 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
SDF2-203ENST00000585749 FAM122AQ96E09 287 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 P2RX7Q99572 595 aaKnown RBP11.27□□□□□ -0.61
SDF2-203ENST00000585749 APBA2Q99767 749 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 CCDC8Q9H0W5 538 aaPredicted RBP11.27□□□□□ -0.61
SDF2-203ENST00000585749 PORCNQ9H237 461 aa11.27□□□□□ -0.61
SDF2-203ENST00000585749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.27□□□□□ -0.61
SDF2-203ENST00000585749 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms