RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
CASC3-210ENST00000584997 COL6A1P12109 1028 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP14P54578 494 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
CASC3-210ENST00000584997 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 LRRC26Q2I0M4 334 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 MFSD14CQ5VZR4 134 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 LHX8Q68G74 356 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 MIGA1Q8NAN2 632 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
CASC3-210ENST00000584997 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
CASC3-210ENST00000584997 PIH1D3Q9NQM4 214 aaKnown RBP12.69□□□□□ -0.38
CASC3-210ENST00000584997 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
CASC3-210ENST00000584997 ATP8B2P98198 1209 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 ZKSCAN2Q63HK3 967 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 TATDN1Q6P1N9 297 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 DBNLQ9UJU6 430 aaKnown RBP12.68□□□□□ -0.38
CASC3-210ENST00000584997 STXBP5LQ9Y2K9 1186 aa12.68□□□□□ -0.38
CASC3-210ENST00000584997 CNMDO75829 334 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 CNGA1P29973 690 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 ABCB5Q2M3G0 1257 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 CERKLQ49MI3 558 aaPredicted RBP12.67□□□□□ -0.38
CASC3-210ENST00000584997 POTEEQ6S8J3 1075 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 CATSPERGQ6ZRH7 1159 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 TTC6Q86TZ1 520 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 LBHD1Q9BQE6 289 aaPredicted RBP12.67□□□□□ -0.38
CASC3-210ENST00000584997 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
CASC3-210ENST00000584997 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
CASC3-210ENST00000584997 EHD4Q9H223 541 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
CASC3-210ENST00000584997 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
CASC3-210ENST00000584997 NAV1Q8NEY1 1877 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 SLC15A5A6NIM6 579 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 MSCO60682 206 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 VCAM1P19320 739 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 MAP3K12Q12852 859 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
CASC3-210ENST00000584997 KIAA1683Q9H0B3 1180 aa12.66□□□□□ -0.38
CASC3-210ENST00000584997 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
CASC3-210ENST00000584997 PTPREP23469 700 aa12.65□□□□□ -0.38
CASC3-210ENST00000584997 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
CASC3-210ENST00000584997 GRB14Q14449 540 aa12.65□□□□□ -0.38
CASC3-210ENST00000584997 LBX2Q6XYB7 198 aa12.65□□□□□ -0.38
CASC3-210ENST00000584997 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
CASC3-210ENST00000584997 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
CASC3-210ENST00000584997 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
CASC3-210ENST00000584997 FLRT1Q9NZU1 646 aa12.65□□□□□ -0.38
CASC3-210ENST00000584997 PRKAG2Q9UGJ0 569 aa12.65□□□□□ -0.38
CASC3-210ENST00000584997 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
CASC3-210ENST00000584997 POLR3DP05423 398 aaPredicted RBP12.64□□□□□ -0.39
CASC3-210ENST00000584997 HOXC6P09630 235 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 CYP2C19P33261 490 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
CASC3-210ENST00000584997 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 LPAR1Q92633 364 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 ANTXR1Q9H6X2 564 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 NOP58Q9Y2X3 529 aaKnown RBP12.64□□□□□ -0.39
CASC3-210ENST00000584997 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
CASC3-210ENST00000584997 MYH8P13535 1937 aa12.64□□□□□ -0.39
CASC3-210ENST00000584997 ZNF236Q9UL36 1845 aa12.63□□□□□ -0.39
CASC3-210ENST00000584997 DNM1LO00429 736 aa12.63□□□□□ -0.39
CASC3-210ENST00000584997 MPHOSPH10O00566 681 aaKnown RBP12.63□□□□□ -0.39
CASC3-210ENST00000584997 SHMT1P34896 483 aa12.63□□□□□ -0.39
CASC3-210ENST00000584997 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
CASC3-210ENST00000584997 NPLOC4Q8TAT6 608 aa12.63□□□□□ -0.39
CASC3-210ENST00000584997 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
CASC3-210ENST00000584997 RLFQ13129 1914 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 MAGEB6P1A0A0J9YX57 407 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 CYBAP13498 195 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 ADORA2AP29274 412 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 PLCD1P51178 756 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 RTP1P59025 263 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 SEPT2Q15019 361 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 AACSQ86V21 672 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 ERC1Q8IUD2 1116 aa12.62□□□□□ -0.39
CASC3-210ENST00000584997 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
CASC3-210ENST00000584997 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
CASC3-210ENST00000584997 ATP11BQ9Y2G3 1177 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms