RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 ERO1AQ96HE7 468 aa29.73■■■□□ 2.35
TTC39C-209ENST00000584250 SLC45A1Q9Y2W3 748 aa29.73■■■□□ 2.35
TTC39C-209ENST00000584250 TRIM17Q9Y577 477 aa29.73■■■□□ 2.35
TTC39C-209ENST00000584250 BCRP11274 1271 aa29.72■■■□□ 2.35
TTC39C-209ENST00000584250 TTC22Q5TAA0 569 aa29.72■■■□□ 2.35
TTC39C-209ENST00000584250 ROBO3Q96MS0 1386 aa29.72■■■□□ 2.35
TTC39C-209ENST00000584250 C19orf81C9J6K1 198 aa29.71■■■□□ 2.35
TTC39C-209ENST00000584250 RASA1P20936 1047 aa29.71■■■□□ 2.35
TTC39C-209ENST00000584250 MCMDC2Q4G0Z9 681 aa29.71■■■□□ 2.35
TTC39C-209ENST00000584250 FEZ1Q99689 392 aa29.71■■■□□ 2.35
TTC39C-209ENST00000584250 NAPBQ9H115 298 aa29.71■■■□□ 2.35
TTC39C-209ENST00000584250 ASCC2Q9H1I8 757 aaPredicted RBP29.71■■■□□ 2.35
TTC39C-209ENST00000584250 TMOD4Q9NZQ9 345 aa29.71■■■□□ 2.35
TTC39C-209ENST00000584250 PRDM1O75626 825 aa29.7■■■□□ 2.35
TTC39C-209ENST00000584250 TMEM179Q6ZVK1 233 aa29.7■■■□□ 2.35
TTC39C-209ENST00000584250 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.7■■■□□ 2.35
TTC39C-209ENST00000584250 PEX10O60683 326 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 LACTBP83111 547 aaPredicted RBP29.69■■■□□ 2.34
TTC39C-209ENST00000584250 USP17L2Q6R6M4 530 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 CCDC17Q96LX7 622 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 NACAP1Q9BZK3 213 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 KIAA1683Q9H0B3 1180 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 TAOK2Q9UL54 1235 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 TACC3Q9Y6A5 838 aa29.69■■■□□ 2.34
TTC39C-209ENST00000584250 KIAA1755Q5JYT7 1200 aa29.68■■■□□ 2.34
TTC39C-209ENST00000584250 EFCC1Q9HA90 598 aa29.68■■■□□ 2.34
TTC39C-209ENST00000584250 INCENPQ9NQS7 918 aa29.68■■■□□ 2.34
TTC39C-209ENST00000584250 GREB1LQ9C091 1923 aaPredicted RBP29.67■■■□□ 2.34
TTC39C-209ENST00000584250 PPARAQ07869 468 aa29.67■■■□□ 2.34
TTC39C-209ENST00000584250 CWC27Q6UX04 472 aaKnown RBP29.67■■■□□ 2.34
TTC39C-209ENST00000584250 TICAM2Q86XR7 235 aa29.67■■■□□ 2.34
TTC39C-209ENST00000584250 SMCR8Q8TEV9 937 aaPredicted RBP29.67■■■□□ 2.34
TTC39C-209ENST00000584250 IL25Q9H293 177 aa29.67■■■□□ 2.34
TTC39C-209ENST00000584250 CCDC171Q6TFL3 1326 aa29.67■■■□□ 2.34
TTC39C-209ENST00000584250 HOXA7P31268 230 aaPredicted RBP29.66■■■□□ 2.34
TTC39C-209ENST00000584250 CTDSPL2Q05D32 466 aa29.66■■■□□ 2.34
TTC39C-209ENST00000584250 POTEEQ6S8J3 1075 aa29.66■■■□□ 2.34
TTC39C-209ENST00000584250 ANKRD13CQ8N6S4 541 aa29.66■■■□□ 2.34
TTC39C-209ENST00000584250 C12orf42Q96LP6 360 aa29.66■■■□□ 2.34
TTC39C-209ENST00000584250 P2RX7Q99572 595 aaKnown RBP29.66■■■□□ 2.34
TTC39C-209ENST00000584250 HSPD1P10809 573 aaKnown RBP29.65■■■□□ 2.34
TTC39C-209ENST00000584250 ICA1Q05084 483 aa29.65■■■□□ 2.34
TTC39C-209ENST00000584250 FBXO46Q6PJ61 603 aaPredicted RBP29.65■■■□□ 2.34
TTC39C-209ENST00000584250 TRIM47Q96LD4 638 aa29.65■■■□□ 2.34
TTC39C-209ENST00000584250 MKNK2Q9HBH9 465 aa29.65■■■□□ 2.34
TTC39C-209ENST00000584250 HPS5Q9UPZ3 1129 aa29.65■■■□□ 2.34
TTC39C-209ENST00000584250 FGAP02671 866 aa29.64■■■□□ 2.34
TTC39C-209ENST00000584250 VCAM1P19320 739 aa29.64■■■□□ 2.34
TTC39C-209ENST00000584250 OSBPP22059 807 aa29.64■■■□□ 2.34
TTC39C-209ENST00000584250 DIAPH3Q9NSV4 1193 aa29.64■■■□□ 2.34
TTC39C-209ENST00000584250 PNMA3Q9UL41 463 aa29.64■■■□□ 2.34
TTC39C-209ENST00000584250 EEF2P13639 858 aaKnown RBP29.63■■■□□ 2.33
TTC39C-209ENST00000584250 PSMC4P43686 418 aa29.63■■■□□ 2.33
TTC39C-209ENST00000584250 PABPC4Q13310 644 aaKnown RBP eCLIP29.63■■■□□ 2.33
TTC39C-209ENST00000584250 ALX1Q15699 326 aa29.63■■■□□ 2.33
TTC39C-209ENST00000584250 PKN2Q16513 984 aaKnown RBP29.63■■■□□ 2.33
TTC39C-209ENST00000584250 PTPN22Q9Y2R2 807 aa29.63■■■□□ 2.33
TTC39C-209ENST00000584250 CCDC85CA6NKD9 419 aa29.62■■■□□ 2.33
TTC39C-209ENST00000584250 USP14P54578 494 aa29.62■■■□□ 2.33
TTC39C-209ENST00000584250 IRX3P78415 501 aaPredicted RBP29.62■■■□□ 2.33
TTC39C-209ENST00000584250 CENPQQ7L2Z9 268 aaPredicted RBP29.62■■■□□ 2.33
TTC39C-209ENST00000584250 ATP2B2Q01814 1243 aa29.61■■■□□ 2.33
TTC39C-209ENST00000584250 TXNRD2Q9NNW7 524 aa29.61■■■□□ 2.33
TTC39C-209ENST00000584250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.61■■■□□ 2.33
TTC39C-209ENST00000584250 TMX2Q9Y320 296 aa29.61■■■□□ 2.33
TTC39C-209ENST00000584250 HTTP42858 3142 aa29.61■■■□□ 2.33
TTC39C-209ENST00000584250 MGAMO43451 1857 aa29.61■■■□□ 2.33
TTC39C-209ENST00000584250 HERVK_113P62684 666 aa29.6■■■□□ 2.33
TTC39C-209ENST00000584250 KIF22Q14807 665 aa29.6■■■□□ 2.33
TTC39C-209ENST00000584250 FAM47AQ5JRC9 791 aa29.6■■■□□ 2.33
TTC39C-209ENST00000584250 RPAP3Q9H6T3 665 aaPredicted RBP29.6■■■□□ 2.33
TTC39C-209ENST00000584250 KANSL2Q9H9L4 492 aa29.6■■■□□ 2.33
TTC39C-209ENST00000584250 IGKV6D-41A0A0C4DH26 115 aa29.59■■■□□ 2.33
TTC39C-209ENST00000584250 CATSPERGQ6ZRH7 1159 aa29.59■■■□□ 2.33
TTC39C-209ENST00000584250 SPICE1Q8N0Z3 855 aa29.59■■■□□ 2.33
TTC39C-209ENST00000584250 ARHGEF10LQ9HCE6 1279 aa29.59■■■□□ 2.33
TTC39C-209ENST00000584250 PTCH2Q9Y6C5 1203 aa29.59■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L15C9J2P7 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L13C9JLJ4 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L11C9JVI0 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L18D6R9N7 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L22D6RA61 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L17D6RBQ6 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L19D6RCP7 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L20D6RJB6 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 HAND2P61296 217 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 USP17L24Q0WX57 530 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 FAM110CQ1W6H9 321 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 ZNF444Q8N0Y2 327 aaPredicted RBP29.58■■■□□ 2.33
TTC39C-209ENST00000584250 NBPF3Q9H094 633 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 ANAPC4Q9UJX5 808 aa29.58■■■□□ 2.33
TTC39C-209ENST00000584250 DOCK3Q8IZD9 2030 aa29.57■■■□□ 2.32
TTC39C-209ENST00000584250 HIP1O00291 1037 aa29.57■■■□□ 2.32
TTC39C-209ENST00000584250 FMNL1O95466 1100 aaPredicted RBP29.57■■■□□ 2.32
TTC39C-209ENST00000584250 GCLCP48506 637 aaPredicted RBP29.57■■■□□ 2.32
TTC39C-209ENST00000584250 PDE4BQ07343 736 aa29.57■■■□□ 2.32
TTC39C-209ENST00000584250 NKX2-3Q8TAU0 364 aa29.57■■■□□ 2.32
TTC39C-209ENST00000584250 VCPKMTQ9H867 229 aa29.57■■■□□ 2.32
TTC39C-209ENST00000584250 RBPJLQ9UBG7 517 aa29.57■■■□□ 2.32
TTC39C-209ENST00000584250 CHMLP26374 656 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms