RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DIXDC1Q155Q3 683 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
CCDC47-206ENST00000584112 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 PRRT2Q7Z6L0 340 aaPredicted RBP13.7□□□□□ -0.22
CCDC47-206ENST00000584112 FAM151AQ8WW52 585 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 NCOR2Q9Y618 2525 aa13.69□□□□□ -0.22
CCDC47-206ENST00000584112 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
CCDC47-206ENST00000584112 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
CCDC47-206ENST00000584112 DZIP1Q86YF9 867 aaKnown RBP13.69□□□□□ -0.22
CCDC47-206ENST00000584112 NEUROD6Q96NK8 337 aa13.69□□□□□ -0.22
CCDC47-206ENST00000584112 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
CCDC47-206ENST00000584112 FAM186AA6NE01 2351 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 CACNA1HO95180 2353 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 A0A0G2JMZ2 1700 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 RGS20O76081 388 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 ZKSCAN1P17029 563 aaPredicted RBP13.68□□□□□ -0.22
CCDC47-206ENST00000584112 FPGSQ05932 587 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 GJC2Q5T442 439 aaPredicted RBP13.68□□□□□ -0.22
CCDC47-206ENST00000584112 CDC42EP5Q6NZY7 148 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 FASTKD5Q7L8L6 764 aaKnown RBP13.68□□□□□ -0.22
CCDC47-206ENST00000584112 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 HERVK_113Q902F9 699 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC47-206ENST00000584112 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 MYO15AQ9UKN7 3530 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 PHIPQ8WWQ0 1821 aa13.68□□□□□ -0.22
CCDC47-206ENST00000584112 GAKO14976 1311 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 TCP10Q12799 353 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 KCTD2Q14681 263 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 KRT40Q6A162 431 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 SLC45A1Q9Y2W3 748 aa13.67□□□□□ -0.22
CCDC47-206ENST00000584112 RFXAPO00287 272 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 DNM1LO00429 736 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 PEX10O60683 326 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 UQCRFS1P1P0C7P4 283 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
CCDC47-206ENST00000584112 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 TLE2Q04725 743 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
CCDC47-206ENST00000584112 COL9A2Q14055 689 aaPredicted RBP13.66□□□□□ -0.22
CCDC47-206ENST00000584112 POLA2Q14181 598 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 TREML2Q5T2D2 321 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 SPATA5Q8NB90 893 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 SSH3Q8TE77 659 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
CCDC47-206ENST00000584112 GPR108Q9NPR9 543 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
CCDC47-206ENST00000584112 ZHX2Q9Y6X8 837 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 WDR87Q6ZQQ6 2873 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 MYH1P12882 1939 aa13.66□□□□□ -0.22
CCDC47-206ENST00000584112 ACACBO00763 2458 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 ENTPD3O75355 529 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 GSTO1P78417 241 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 NFIAQ12857 509 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 SNX17Q15036 470 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 NOL9Q5SY16 702 aaKnown RBP13.65□□□□□ -0.22
CCDC47-206ENST00000584112 GJD3Q8N144 294 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 IDI2Q9BXS1 227 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 FAM198AQ9UFP1 575 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 COG5Q9UP83 839 aa13.65□□□□□ -0.22
CCDC47-206ENST00000584112 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 ANKRD11Q6UB99 2663 aaPredicted RBP13.64□□□□□ -0.23
CCDC47-206ENST00000584112 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 MED19A0JLT2 244 aaPredicted RBP13.64□□□□□ -0.23
CCDC47-206ENST00000584112 LDHCP07864 332 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 MS4A1P11836 297 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 RAG1P15918 1043 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 MECOMQ03112 1051 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 IER5LQ5T953 404 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 FERMT2Q96AC1 680 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
CCDC47-206ENST00000584112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.64□□□□□ -0.23
CCDC47-206ENST00000584112 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
CCDC47-206ENST00000584112 MAP4K4O95819 1239 aaPredicted RBP13.63□□□□□ -0.23
CCDC47-206ENST00000584112 RLBP1P12271 317 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 XRCC5P13010 732 aaKnown RBP13.63□□□□□ -0.23
CCDC47-206ENST00000584112 ALADP13716 330 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 SSTR3P32745 418 aaPredicted RBP13.63□□□□□ -0.23
CCDC47-206ENST00000584112 BTDP43251 543 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 RGS3P49796 1198 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 LPAR1Q92633 364 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 HLA-CQ95604 372 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 NUDT12Q9BQG2 462 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 C1orf115Q9H7X2 142 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 SLC28A3Q9HAS3 691 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.63□□□□□ -0.23
CCDC47-206ENST00000584112 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
CCDC47-206ENST00000584112 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 MTCH2Q9Y6C9 303 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 FPGT-TNNI3KV9GXZ4 949 aa13.63□□□□□ -0.23
CCDC47-206ENST00000584112 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms