RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 BACE1P56817 501 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 SREBF2Q12772 1141 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBBP4-201ENST00000583708 USP17L2Q6R6M4 530 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
UBBP4-201ENST00000583708 TBC1D10CQ8IV04 446 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
UBBP4-201ENST00000583708 SLC44A5Q8NCS7 719 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 OPTNQ96CV9 577 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 UBAC1Q9BSL1 405 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 ELP3Q9H9T3 547 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 SLC45A1Q9Y2W3 748 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 TMX2Q9Y320 296 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 BAZ2AQ9UIF9 1905 aaKnown RBP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 FAM196BA6NMK8 535 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 KDM4AO75164 1064 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 ALDH1A1P00352 501 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 TOP1P11387 765 aaKnown RBP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 LIFRP42702 1097 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 TM4SF4P48230 202 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 ICA1Q05084 483 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 RRP1BQ14684 758 aaKnown RBP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 SEPT2Q15019 361 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 SLC4A8Q2Y0W8 1093 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 MOB2Q70IA6 237 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 RASAL3Q86YV0 1011 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 CLMNQ96JQ2 1002 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 C12orf42Q96LP6 360 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 ZSCAN10Q96SZ4 725 aaPredicted RBP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 ALDH8A1Q9H2A2 487 aaPredicted RBP10.96□□□□□ -0.65
UBBP4-201ENST00000583708 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 SNX14Q9Y5W7 946 aa10.96□□□□□ -0.65
UBBP4-201ENST00000583708 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
UBBP4-201ENST00000583708 FAM155AB1AL88 458 aaPredicted RBP10.95□□□□□ -0.66
UBBP4-201ENST00000583708 B4E1Z4 1266 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 PRDM1O75626 825 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 GDF11O95390 407 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 RCAN1P53805 252 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 EXOSC10Q01780 885 aaKnown RBP10.95□□□□□ -0.66
UBBP4-201ENST00000583708 SPP2Q13103 211 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 PPP2R5BQ15173 497 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 RRP12Q5JTH9 1297 aaKnown RBP10.95□□□□□ -0.66
UBBP4-201ENST00000583708 BLOC1S2Q6QNY1 142 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
UBBP4-201ENST00000583708 MB21D2Q8IYB1 491 aaPredicted RBP10.95□□□□□ -0.66
UBBP4-201ENST00000583708 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 GMCL1P1Q8NEA9 526 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 CAPNS2Q96L46 248 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 MAP3K14Q99558 947 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 C22orf23Q9BZE7 217 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 TMOD4Q9NZQ9 345 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 CYP46A1Q9Y6A2 500 aa10.95□□□□□ -0.66
UBBP4-201ENST00000583708 NEDD4P46934 1319 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 WDR33Q9C0J8 1336 aaKnown RBP10.94□□□□□ -0.66
UBBP4-201ENST00000583708 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
UBBP4-201ENST00000583708 IRF6O14896 467 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 PLA2G6O60733 806 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 FDX1P10109 184 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 EEF2P13639 858 aaKnown RBP10.94□□□□□ -0.66
UBBP4-201ENST00000583708 HOXA7P31268 230 aaPredicted RBP10.94□□□□□ -0.66
UBBP4-201ENST00000583708 EVX2Q03828 476 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 ANKRD1Q15327 319 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 FAM47AQ5JRC9 791 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 ANKRD23Q86SG2 305 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 SIAH1Q8IUQ4 282 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 GTF3C2Q8WUA4 911 aaPredicted RBP10.94□□□□□ -0.66
UBBP4-201ENST00000583708 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 CEP95Q96GE4 821 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 MS4A4AQ96JQ5 239 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 VCPKMTQ9H867 229 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 IL17RBQ9NRM6 502 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 CLIP2Q9UDT6 1046 aa10.94□□□□□ -0.66
UBBP4-201ENST00000583708 SIPA1L1O43166 1804 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 LAMB1P07942 1786 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 SMIM22K7EJ46 135 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 WDR46O15213 610 aaKnown RBP10.93□□□□□ -0.66
UBBP4-201ENST00000583708 CA12O43570 354 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 PRC1O43663 620 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 SEC24BO95487 1268 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 CALM1P0DP23 149 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 CALM2P0DP24 149 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 CALM3P0DP25 149 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 RPS6KB1P23443 525 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 JAG1P78504 1218 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 MAP2K1Q02750 393 aaPredicted RBP10.93□□□□□ -0.66
UBBP4-201ENST00000583708 SEC23AQ15436 765 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 IFIT1BQ5T764 474 aaKnown RBP10.93□□□□□ -0.66
UBBP4-201ENST00000583708 SYNE3Q6ZMZ3 975 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 STOX1Q6ZVD7 989 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 SGMS1Q86VZ5 419 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 IGDCC4Q8TDY8 1250 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 GMCL1Q96IK5 515 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms