RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CD96P40200 585 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 HDLBPQ00341 1268 aaKnown RBP6.14□□□□□ -1.43
VAPA-206ENST00000583475 CLCQ05315 142 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 C9orf131Q5VYM1 1079 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 ABI1Q8IZP0 508 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 REXO1Q8N1G1 1221 aaKnown RBP6.14□□□□□ -1.43
VAPA-206ENST00000583475 FLCNQ8NFG4 579 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 KLHL3Q9UH77 587 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 COL17A1Q9UMD9 1497 aaPredicted RBP6.14□□□□□ -1.43
VAPA-206ENST00000583475 CBX7O95931 251 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 CYP7A1P22680 504 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 ZNF746Q6NUN9 644 aaPredicted RBP6.13□□□□□ -1.43
VAPA-206ENST00000583475 TP53INP2Q8IXH6 220 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 BAHD1Q8TBE0 780 aaPredicted RBP6.13□□□□□ -1.43
VAPA-206ENST00000583475 ZNF428Q96B54 188 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 HRASLS5Q96KN8 279 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 ADGRE2Q9UHX3 823 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 CAPN6Q9Y6Q1 641 aa6.13□□□□□ -1.43
VAPA-206ENST00000583475 MCM4P33991 863 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 ETV3P41162 512 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 ZNF165P49910 485 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 GK5Q6ZS86 529 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 NT5DC4Q86YG4 428 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 ZNF654Q8IZM8 581 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 MFSD4AQ8N468 514 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 COX4I2Q96KJ9 171 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 Q96M66 194 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 HSPA12BQ96MM6 686 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 KIF2CQ99661 725 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 SEMA3GQ9NS98 782 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 ST14Q9Y5Y6 855 aa6.12□□□□□ -1.43
VAPA-206ENST00000583475 PITPNM2Q9BZ72 1349 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 FAM155AB1AL88 458 aaPredicted RBP6.11□□□□□ -1.43
VAPA-206ENST00000583475 RGS13O14921 159 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 KIR3DL1P43629 444 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 CLCN7P51798 805 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 TNK2Q07912 1038 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 MLECQ14165 292 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 ARSHQ5FYA8 562 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 CDKAL1Q5VV42 579 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 CDCP2Q5VXM1 449 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 ASB11Q8WXH4 323 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 ANTXR1Q9H6X2 564 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 PODXL2Q9NZ53 605 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 GMIPQ9P107 970 aa6.11□□□□□ -1.43
VAPA-206ENST00000583475 FUT4P22083 530 aa6.1□□□□□ -1.43
VAPA-206ENST00000583475 CBLL1Q75N03 491 aa6.1□□□□□ -1.43
VAPA-206ENST00000583475 PIWIL2Q8TC59 973 aaKnown RBP6.1□□□□□ -1.43
VAPA-206ENST00000583475 VWCEQ96DN2 955 aa6.1□□□□□ -1.43
VAPA-206ENST00000583475 ATG4CQ96DT6 458 aa6.1□□□□□ -1.43
VAPA-206ENST00000583475 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
VAPA-206ENST00000583475 LRRN2O75325 713 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 UBOX5O94941 541 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 IRAK1P51617 712 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 PAK2Q13177 524 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 OVOS1Q6IE37 1185 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 RNF141Q8WVD5 230 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 KREMEN1Q96MU8 473 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 DUSP15Q9H1R2 295 aaPredicted RBP6.09□□□□□ -1.43
VAPA-206ENST00000583475 ATP13A1Q9HD20 1204 aa6.09□□□□□ -1.43
VAPA-206ENST00000583475 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.09□□□□□ -1.43
VAPA-206ENST00000583475 H3BS24 57 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 RAG1P15918 1043 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 GBP1P32455 592 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 TNNI2P48788 182 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 RAD51AP2Q09MP3 1159 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 PLCL1Q15111 1095 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 LRRFIP1Q32MZ4 808 aaKnown RBP6.08□□□□□ -1.44
VAPA-206ENST00000583475 ANGEL2Q5VTE6 544 aaKnown RBP6.08□□□□□ -1.44
VAPA-206ENST00000583475 TMEM40Q8WWA1 233 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 UBE2FQ969M7 185 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 ZSWIM5Q9P217 1185 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
VAPA-206ENST00000583475 MEIS3P2A8K0S8 358 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 SRFP11831 508 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 NME1P15531 152 aaKnown RBP6.07□□□□□ -1.44
VAPA-206ENST00000583475 TAL1P17542 331 aaPredicted RBP6.07□□□□□ -1.44
VAPA-206ENST00000583475 POLR2BP30876 1174 aaKnown RBP6.07□□□□□ -1.44
VAPA-206ENST00000583475 IKZF1Q13422 519 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 NLRC3Q7RTR2 1065 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 THAP5Q7Z6K1 395 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 DTWD2Q8NBA8 298 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 PI4K2BQ8TCG2 481 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 MBNL3Q9NUK0 354 aaKnown RBP6.07□□□□□ -1.44
VAPA-206ENST00000583475 LMCD1Q9NZU5 365 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 ADAMTS6Q9UKP5 1117 aa6.07□□□□□ -1.44
VAPA-206ENST00000583475 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
VAPA-206ENST00000583475 RNASE1P07998 156 aaKnown RBP6.06□□□□□ -1.44
VAPA-206ENST00000583475 ZP2Q05996 745 aa6.06□□□□□ -1.44
VAPA-206ENST00000583475 INTS3Q68E01 1043 aaKnown RBP6.06□□□□□ -1.44
VAPA-206ENST00000583475 SLC23A3Q6PIS1 610 aa6.06□□□□□ -1.44
VAPA-206ENST00000583475 RASGRP4Q8TDF6 673 aa6.06□□□□□ -1.44
VAPA-206ENST00000583475 TGIF2Q9GZN2 237 aa6.06□□□□□ -1.44
VAPA-206ENST00000583475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.06□□□□□ -1.44
VAPA-206ENST00000583475 PRDM7Q9NQW5 492 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms