RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 RASEFQ8IZ41 740 aa15.4■□□□□ 0.06
ERBB2-215ENST00000583391 NEDD1Q8NHV4 660 aa15.4■□□□□ 0.06
ERBB2-215ENST00000583391 ESR2Q92731 530 aa15.4■□□□□ 0.06
ERBB2-215ENST00000583391 CCDC102AQ96A19 550 aa15.4■□□□□ 0.06
ERBB2-215ENST00000583391 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.4■□□□□ 0.06
ERBB2-215ENST00000583391 AS3MTQ9HBK9 375 aa15.4■□□□□ 0.06
ERBB2-215ENST00000583391 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
ERBB2-215ENST00000583391 NMT2O60551 498 aa15.39■□□□□ 0.05
ERBB2-215ENST00000583391 ZKSCAN1P17029 563 aaPredicted RBP15.39■□□□□ 0.05
ERBB2-215ENST00000583391 ATP2B2Q01814 1243 aa15.39■□□□□ 0.05
ERBB2-215ENST00000583391 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
ERBB2-215ENST00000583391 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
ERBB2-215ENST00000583391 FEZ1Q99689 392 aa15.39■□□□□ 0.05
ERBB2-215ENST00000583391 AFG3L2Q9Y4W6 797 aa15.39■□□□□ 0.05
ERBB2-215ENST00000583391 IGKV6D-41A0A0C4DH26 115 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 SPP2Q13103 211 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 MTMR2Q13614 643 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
ERBB2-215ENST00000583391 ZNF280CQ8ND82 737 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 ACER1Q8TDN7 264 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 ZIC5Q96T25 663 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 ZKSCAN3Q9BRR0 538 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 KCNH4Q9UQ05 1017 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 SNX14Q9Y5W7 946 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 MYH6P13533 1939 aa15.38■□□□□ 0.05
ERBB2-215ENST00000583391 COL11A1P12107 1806 aaPredicted RBP15.38■□□□□ 0.05
ERBB2-215ENST00000583391 EEF2P13639 858 aaKnown RBP15.37■□□□□ 0.05
ERBB2-215ENST00000583391 NOGQ13253 232 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 SNAPC2Q13487 334 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 DGKZQ13574 1117 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
ERBB2-215ENST00000583391 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
ERBB2-215ENST00000583391 CCL15-CCL14A0A0B4J2E2 113 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 USP17L10C9JJH3 530 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 NT5C2P49902 561 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 GTF2A2P52657 109 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 HMGCS2P54868 508 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 COL9A3Q14050 684 aaPredicted RBP15.36■□□□□ 0.05
ERBB2-215ENST00000583391 KRT32Q14532 448 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 CCL15Q16663 113 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 GADL1Q6ZQY3 521 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 IQCA1Q86XH1 822 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 LRRC47Q8N1G4 583 aaKnown RBP15.36■□□□□ 0.05
ERBB2-215ENST00000583391 KCNB2Q92953 911 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
ERBB2-215ENST00000583391 UBAC1Q9BSL1 405 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 MTMR4Q9NYA4 1195 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 ZSWIM5Q9P217 1185 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 STX8Q9UNK0 236 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 RLFQ13129 1914 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 TNKSO95271 1327 aa15.36■□□□□ 0.05
ERBB2-215ENST00000583391 A0A0G2JLL6 359 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-215ENST00000583391 MANSC4A6NHS7 340 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-215ENST00000583391 CXCL11O14625 94 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 TTLL1O95922 423 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 ANTXR2P58335 489 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-215ENST00000583391 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 PRRT2Q7Z6L0 340 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-215ENST00000583391 MS4A4AQ96JQ5 239 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 NEK1Q96PY6 1258 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 SH2D4AQ9H788 454 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 NYAP2Q9P242 653 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
ERBB2-215ENST00000583391 PRC1O43663 620 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 RAD21O60216 631 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 CETPP11597 493 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 BACE1P56817 501 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 SREBF2Q12772 1141 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 SIAH1Q8IUQ4 282 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 BRI3BPQ8WY22 251 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-215ENST00000583391 BACH2Q9BYV9 841 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 TCP11L1Q9NUJ3 509 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 A0A0G2JMZ2 1700 aa15.34■□□□□ 0.05
ERBB2-215ENST00000583391 CPA1P15085 419 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
ERBB2-215ENST00000583391 MCM5P33992 734 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 USP14P54578 494 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 PPP4R3BQ5MIZ7 849 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 ENAHQ8N8S7 591 aaPredicted RBP15.33■□□□□ 0.04
ERBB2-215ENST00000583391 TCEANC2Q96MN5 208 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 KIAA1683Q9H0B3 1180 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.04
ERBB2-215ENST00000583391 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 TMOD4Q9NZQ9 345 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 MTMR7Q9Y216 660 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
ERBB2-215ENST00000583391 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 IFIT3O14879 490 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms