RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CCDC65Q8IXS2 484 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 DHX58Q96C10 678 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 HOOK2Q96ED9 719 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 WWC3Q9ULE0 1092 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 RABGAP1Q9Y3P9 1069 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 TNKSO95271 1327 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 TRIM37O94972 964 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 ADAMTS2O95450 1211 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 LMOD1P29536 600 aaPredicted RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 ETF1P62495 437 aaKnown RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 KIF5AQ12840 1032 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 SF3B3Q15393 1217 aaKnown RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 DHTKD1Q96HY7 919 aaPredicted RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 CALR3Q96L12 384 aaKnown RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 CCNL1Q9UK58 526 aaPredicted RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 DKC1O60832 514 aaKnown RBP eCLIP6.59□□□□□ -1.36
RTTN-209ENST00000583043 FOSP01100 380 aaPredicted RBP6.59□□□□□ -1.36
RTTN-209ENST00000583043 TRIM21P19474 475 aaKnown RBP6.59□□□□□ -1.36
RTTN-209ENST00000583043 PPP2R5EQ16537 467 aa6.59□□□□□ -1.36
RTTN-209ENST00000583043 RESP18Q5W5W9 173 aa6.59□□□□□ -1.36
RTTN-209ENST00000583043 BLIDQ8IZY5 108 aa6.59□□□□□ -1.36
RTTN-209ENST00000583043 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.36
RTTN-209ENST00000583043 STK17AQ9UEE5 414 aa6.59□□□□□ -1.36
RTTN-209ENST00000583043 M0R2C6 588 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 TBCAO75347 108 aaKnown RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 PTPREP23469 700 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 CCDC96Q2M329 555 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 CCDC40Q4G0X9 1142 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 ASPRV1Q53RT3 343 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 PLA2G4DQ86XP0 818 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 GPR161Q8N6U8 529 aaKnown RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 NFE2L3Q9Y4A8 694 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 EFCAB8A8MWE9 144 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 C6orf229H3BNL8 230 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 RPS6KA4O75676 772 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 DNM2P50570 870 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 RBM10P98175 930 aaKnown RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 SBK1Q52WX2 424 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 GPATCH4Q5T3I0 446 aaKnown RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 KLHL10Q6JEL2 608 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 HAUS4Q9H6D7 363 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 ANAPC4Q9UJX5 808 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 GTF2F1P35269 517 aaKnown RBP eCLIP6.58□□□□□ -1.36
RTTN-209ENST00000583043 TEX11Q8IYF3 940 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 PANX2Q96RD6 677 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 STX8Q9UNK0 236 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 V9GY48 417 aaPredicted RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 KDM6AO15550 1401 aaPredicted RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 JCADQ9P266 1359 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 OPA1O60313 960 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 ASIC1P78348 528 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 PSMD2Q13200 908 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 MICALCLQ6ZW33 695 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 IGSF22Q8N9C0 903 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 U2AF2P26368 475 aaKnown RBP eCLIP6.58□□□□□ -1.361e-5■□□□□ 9.3
RTTN-209ENST00000583043 ABCD1P33897 745 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 ADCY7P51828 1080 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 FMR1NBQ8N0W7 255 aaPredicted RBP6.58□□□□□ -1.36
RTTN-209ENST00000583043 TAOK3Q9H2K8 898 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 RNF14Q9UBS8 474 aa6.58□□□□□ -1.36
RTTN-209ENST00000583043 FAM208AQ9UK61 1670 aaKnown RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 B4DLN1 442 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 PHKA1P46020 1223 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 CEP128Q6ZU80 1094 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 MPHOSPH6Q99547 160 aaKnown RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 NARFQ9UHQ1 456 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 ZNF804BA4D1E1 1349 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 NDC80O14777 642 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 AKR1B10O60218 316 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 PDE6BP35913 854 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 ARHGAP27Q6ZUM4 889 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 CCDC42Q96M95 316 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 NAPGQ99747 312 aaPredicted RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 SELENOOQ9BVL4 669 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 DESP17661 470 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 PAXIP1Q6ZW49 1069 aaPredicted RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 SEC62Q99442 399 aaKnown RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 PUS3Q9BZE2 481 aaKnown RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 RIC8AQ9NPQ8 531 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 CNTNAP4Q9C0A0 1308 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 LARGE1O95461 756 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 CASP7P55210 303 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 SLFN12Q8IYM2 578 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 GOLGA5Q8TBA6 731 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 RUBCNQ92622 972 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 XPO4Q9C0E2 1151 aaKnown RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 ASAP1Q9ULH1 1129 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 SETD1AO15047 1707 aaKnown RBP6.57□□□□□ -1.36
RTTN-209ENST00000583043 PIK3C2AO00443 1686 aa6.57□□□□□ -1.36
RTTN-209ENST00000583043 GNPATO15228 680 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms