RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 GCLCP48506 637 aaPredicted RBP16.71■□□□□ 0.27
GGA3-215ENST00000582821 SEPT2Q15019 361 aa16.71■□□□□ 0.27
GGA3-215ENST00000582821 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
GGA3-215ENST00000582821 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
GGA3-215ENST00000582821 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 CCDC85CA6NKD9 419 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 APPP05067 770 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 PRMT2P55345 433 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
GGA3-215ENST00000582821 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
GGA3-215ENST00000582821 MGAMO43451 1857 aa16.69■□□□□ 0.26
GGA3-215ENST00000582821 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
GGA3-215ENST00000582821 AKR1B1P15121 316 aa16.69■□□□□ 0.26
GGA3-215ENST00000582821 PSMC4P43686 418 aa16.69■□□□□ 0.26
GGA3-215ENST00000582821 TDO2P48775 406 aa16.69■□□□□ 0.26
GGA3-215ENST00000582821 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
GGA3-215ENST00000582821 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
GGA3-215ENST00000582821 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
GGA3-215ENST00000582821 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 FOXP2O15409 715 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 PDE4AP27815 886 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 HOXD10P28358 340 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 CTGFP29279 349 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
GGA3-215ENST00000582821 ALX1Q15699 326 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 FAM110CQ1W6H9 321 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
GGA3-215ENST00000582821 FEZ1Q99689 392 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 KANSL2Q9H9L4 492 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 CENPFP49454 3210 aa16.68■□□□□ 0.26
GGA3-215ENST00000582821 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 SDSP20132 328 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 RASA1P20936 1047 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 CATSPERGQ6ZRH7 1159 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 GTF3C2Q8WUA4 911 aaPredicted RBP16.67■□□□□ 0.26
GGA3-215ENST00000582821 TRIM47Q96LD4 638 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 NAPBQ9H115 298 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 MORF4L1Q9UBU8 362 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
GGA3-215ENST00000582821 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
GGA3-215ENST00000582821 ZSWIM8A7E2V4 1837 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 RGS19P49795 217 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 FCGRTP55899 365 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 NMIQ13287 307 aaPredicted RBP16.66■□□□□ 0.26
GGA3-215ENST00000582821 ANKRD13CQ8N6S4 541 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
GGA3-215ENST00000582821 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
GGA3-215ENST00000582821 HIP1O00291 1037 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
GGA3-215ENST00000582821 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
GGA3-215ENST00000582821 VCAM1P19320 739 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 HERVK_113P62684 666 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 ICA1Q05084 483 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 PPARAQ07869 468 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
GGA3-215ENST00000582821 LPAR1Q92633 364 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
GGA3-215ENST00000582821 PDE4BQ07343 736 aa16.64■□□□□ 0.25
GGA3-215ENST00000582821 TTC22Q5TAA0 569 aa16.64■□□□□ 0.25
GGA3-215ENST00000582821 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
GGA3-215ENST00000582821 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
GGA3-215ENST00000582821 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
GGA3-215ENST00000582821 RBPJLQ9UBG7 517 aa16.64■□□□□ 0.25
GGA3-215ENST00000582821 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
GGA3-215ENST00000582821 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 FGAP02671 866 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
GGA3-215ENST00000582821 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
GGA3-215ENST00000582821 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
GGA3-215ENST00000582821 POTEEQ6S8J3 1075 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 ZNF589Q86UQ0 364 aaPredicted RBP16.63■□□□□ 0.25
GGA3-215ENST00000582821 GPRC5AQ8NFJ5 357 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 VCPKMTQ9H867 229 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
GGA3-215ENST00000582821 FGRP09769 529 aa16.62■□□□□ 0.25
GGA3-215ENST00000582821 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms