RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 ATG4CQ96DT6 458 aa11.34□□□□□ -0.59
CDH8-207ENST00000582242 MRPL18Q9H0U6 180 aaKnown RBP11.34□□□□□ -0.59
CDH8-207ENST00000582242 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
CDH8-207ENST00000582242 CYP4F12Q9HCS2 524 aa11.34□□□□□ -0.59
CDH8-207ENST00000582242 TDRD9Q8NDG6 1382 aaKnown RBP11.33□□□□□ -0.6
CDH8-207ENST00000582242 TNFRSF10CO14798 259 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 ADH5P11766 374 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
CDH8-207ENST00000582242 NUTM2GQ5VZR2 741 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 SDE2Q6IQ49 451 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 ACSF2Q96CM8 615 aaPredicted RBP11.33□□□□□ -0.6
CDH8-207ENST00000582242 FANCD2OSQ96PS1 177 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 ATXN3LQ9H3M9 355 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 SLC12A7Q9Y666 1083 aa11.33□□□□□ -0.6
CDH8-207ENST00000582242 FAM221BA6H8Z2 402 aa11.32□□□□□ -0.6
CDH8-207ENST00000582242 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
CDH8-207ENST00000582242 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
CDH8-207ENST00000582242 DISC1Q9NRI5 854 aa11.32□□□□□ -0.6
CDH8-207ENST00000582242 MYOM3Q5VTT5 1437 aa11.32□□□□□ -0.6
CDH8-207ENST00000582242 TIAF1O95411 115 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 ACRP10323 421 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
CDH8-207ENST00000582242 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
CDH8-207ENST00000582242 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 TJP2Q9UDY2 1190 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 KLHL3Q9UH77 587 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 NCOA2Q15596 1464 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 PTPN23Q9H3S7 1636 aa11.31□□□□□ -0.6
CDH8-207ENST00000582242 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 UGGT2Q9NYU1 1516 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 HFM1A2PYH4 1435 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
CDH8-207ENST00000582242 RASGRF1Q13972 1273 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 HID1Q8IV36 788 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
CDH8-207ENST00000582242 SLFN12Q8IYM2 578 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 ZNF507Q8TCN5 953 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 MICAL1Q8TDZ2 1067 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 IFT140Q96RY7 1462 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
CDH8-207ENST00000582242 CHURC1-FNTBB4DL54 471 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 FAM229AH3BQW9 127 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 PDPK1O15530 556 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 PRRT3Q5FWE3 981 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 TMEM130Q8N3G9 435 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
CDH8-207ENST00000582242 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
CDH8-207ENST00000582242 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
CDH8-207ENST00000582242 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 GJB6O95452 261 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 NEFMP07197 916 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
CDH8-207ENST00000582242 SLC6A19Q695T7 634 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 ANKRD34AQ69YU3 496 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 KCT2Q8NC54 265 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 FAM13CQ8NE31 585 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 WDR62O43379 1518 aa11.28□□□□□ -0.6
CDH8-207ENST00000582242 CAP2P40123 477 aa11.27□□□□□ -0.61
CDH8-207ENST00000582242 TTLL4Q14679 1199 aa11.27□□□□□ -0.61
CDH8-207ENST00000582242 ZYXQ15942 572 aaKnown RBP11.27□□□□□ -0.61
CDH8-207ENST00000582242 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
CDH8-207ENST00000582242 FBRSQ9HAH7 460 aa11.27□□□□□ -0.61
CDH8-207ENST00000582242 UACAQ9BZF9 1416 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 UPK3BL1B0FP48 263 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 UPK3BL2E5RIL1 263 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 F8W735 103 aaPredicted RBP11.26□□□□□ -0.61
CDH8-207ENST00000582242 RAG1P15918 1043 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 CCNFP41002 786 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 C6orf15Q6UXA7 325 aaPredicted RBP11.26□□□□□ -0.61
CDH8-207ENST00000582242 FAM178BQ8IXR5 827 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
CDH8-207ENST00000582242 B2RBV5 119 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 DDAH1O94760 285 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 SPATA31C1P0DKV0 1188 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 DRD2P14416 443 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 IFRD2Q12894 506 aaPredicted RBP11.25□□□□□ -0.61
CDH8-207ENST00000582242 EGFLAMQ63HQ2 1017 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 C12orf50Q8NA57 414 aaPredicted RBP11.25□□□□□ -0.61
CDH8-207ENST00000582242 C2CD4AQ8NCU7 369 aaPredicted RBP11.25□□□□□ -0.61
CDH8-207ENST00000582242 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
CDH8-207ENST00000582242 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
CDH8-207ENST00000582242 PIDD1Q9HB75 910 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
CDH8-207ENST00000582242 ENPP3O14638 875 aa11.24□□□□□ -0.61
CDH8-207ENST00000582242 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
CDH8-207ENST00000582242 SLBPQ14493 270 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDH8-207ENST00000582242 NCAPHQ15003 741 aa11.24□□□□□ -0.61
CDH8-207ENST00000582242 NKG7Q16617 165 aa11.24□□□□□ -0.61
CDH8-207ENST00000582242 CDC37L1Q7L3B6 337 aa11.24□□□□□ -0.61
CDH8-207ENST00000582242 ISL2Q96A47 359 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms