RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 KRT23Q9C075 422 aa17.86■□□□□ 0.45
MKS1-210ENST00000581180 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
MKS1-210ENST00000581180 AS3MTQ9HBK9 375 aa17.86■□□□□ 0.45
MKS1-210ENST00000581180 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
MKS1-210ENST00000581180 WDR33Q9C0J8 1336 aaKnown RBP17.86■□□□□ 0.45
MKS1-210ENST00000581180 TSPY2A6NKD2 308 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 CXCL11O14625 94 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 NOVP48745 357 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 MKRN3Q13064 507 aaKnown RBP17.85■□□□□ 0.45
MKS1-210ENST00000581180 SPP2Q13103 211 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 NOGQ13253 232 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 ESR2Q92731 530 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 MS4A4AQ96JQ5 239 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 KANSL2Q9H9L4 492 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 IL17RBQ9NRM6 502 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 TCP11L1Q9NUJ3 509 aa17.85■□□□□ 0.45
MKS1-210ENST00000581180 A0A1W2PRG0 241 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 AOC2O75106 756 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 KDM4AO75164 1064 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 ICA1Q05084 483 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 NCOA7Q8NI08 942 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 ACER1Q8TDN7 264 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 CEP95Q96GE4 821 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 MTMR4Q9NYA4 1195 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
MKS1-210ENST00000581180 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
MKS1-210ENST00000581180 TESPA1A2RU30 521 aaPredicted RBP17.83■□□□□ 0.44
MKS1-210ENST00000581180 NMT2O60551 498 aa17.83■□□□□ 0.44
MKS1-210ENST00000581180 ZKSCAN1P17029 563 aaPredicted RBP17.83■□□□□ 0.44
MKS1-210ENST00000581180 BACE1P56817 501 aa17.83■□□□□ 0.44
MKS1-210ENST00000581180 TRDNQ13061 729 aa17.83■□□□□ 0.44
MKS1-210ENST00000581180 GRM1Q13255 1194 aa17.83■□□□□ 0.44
MKS1-210ENST00000581180 MOGSQ13724 837 aa17.83■□□□□ 0.44
MKS1-210ENST00000581180 COL9A3Q14050 684 aaPredicted RBP17.83■□□□□ 0.44
MKS1-210ENST00000581180 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
MKS1-210ENST00000581180 MB21D2Q8IYB1 491 aaPredicted RBP17.83■□□□□ 0.44
MKS1-210ENST00000581180 NYAP2Q9P242 653 aa17.83■□□□□ 0.44
MKS1-210ENST00000581180 MANSC4A6NHS7 340 aaPredicted RBP17.82■□□□□ 0.44
MKS1-210ENST00000581180 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 USP17L10C9JJH3 530 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 EEF2P13639 858 aaKnown RBP17.82■□□□□ 0.44
MKS1-210ENST00000581180 MAP2K2P36507 400 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 GTF2A2P52657 109 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 KIF23Q02241 960 aaPredicted RBP17.82■□□□□ 0.44
MKS1-210ENST00000581180 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 SH3D19Q5HYK7 790 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 CYB5R4Q7L1T6 521 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 MKL1Q969V6 931 aa17.82■□□□□ 0.44
MKS1-210ENST00000581180 C19orf81C9J6K1 198 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 TTLL1O95922 423 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 MCCP23508 829 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 ANTXR2P58335 489 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 MTMR2Q13614 643 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 KRT32Q14532 448 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 RCSD1Q6JBY9 416 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
MKS1-210ENST00000581180 BRI3BPQ8WY22 251 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 BACH2Q9BYV9 841 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 KIAA1683Q9H0B3 1180 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 TMX2Q9Y320 296 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 PARP14Q460N5 1801 aa17.81■□□□□ 0.44
MKS1-210ENST00000581180 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 CETPP11597 493 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 TM4SF4P48230 202 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 CCL15Q16663 113 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 IL17RAQ96F46 866 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 C12orf42Q96LP6 360 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 NEK1Q96PY6 1258 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 ZKSCAN3Q9BRR0 538 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 EMILIN3Q9NT22 766 aa17.8■□□□□ 0.44
MKS1-210ENST00000581180 RLFQ13129 1914 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 HMGCS2P54868 508 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 INHBEP58166 350 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 DGKZQ13574 1117 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 SEC23AQ15436 765 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 CCDC178Q5BJE1 867 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 USP17L2Q6R6M4 530 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
MKS1-210ENST00000581180 ANKS1AQ92625 1134 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 TTC14Q96N46 770 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 ZSCAN10Q96SZ4 725 aaPredicted RBP17.79■□□□□ 0.44
MKS1-210ENST00000581180 PTPN18Q99952 460 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 CLIP2Q9UDT6 1046 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 SYNPO2Q9UMS6 1093 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 CEP350Q5VT06 3117 aa17.79■□□□□ 0.44
MKS1-210ENST00000581180 USP14P54578 494 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 ANAPC15P60006 121 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 ATP2B2Q01814 1243 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 SREBF2Q12772 1141 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 KIAA1755Q5JYT7 1200 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 CHST3Q7LGC8 479 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 DGKHQ86XP1 1220 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 ENAHQ8N8S7 591 aaPredicted RBP17.78■□□□□ 0.44
MKS1-210ENST00000581180 PROCA1Q8NCQ7 364 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms