RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 ARPP21Q9UBL0 812 aaPredicted RBP32.17■■■□□ 2.74
LINC00271-207ENST00000580741 SRRDQ9UH36 339 aa32.17■■■□□ 2.74
LINC00271-207ENST00000580741 HOXA7P31268 230 aaPredicted RBP32.16■■■□□ 2.74
LINC00271-207ENST00000580741 SLC9C1Q4G0N8 1177 aa32.16■■■□□ 2.74
LINC00271-207ENST00000580741 ZMYM1Q5SVZ6 1142 aa32.16■■■□□ 2.74
LINC00271-207ENST00000580741 CHD1LQ86WJ1 897 aa32.16■■■□□ 2.74
LINC00271-207ENST00000580741 CLEC10AQ8IUN9 316 aa32.16■■■□□ 2.74
LINC00271-207ENST00000580741 STK11IPQ8N1F8 1099 aa32.16■■■□□ 2.74
LINC00271-207ENST00000580741 ARMC5Q96C12 935 aa32.16■■■□□ 2.74
LINC00271-207ENST00000580741 FAM110CQ1W6H9 321 aa32.15■■■□□ 2.74
LINC00271-207ENST00000580741 P2RX7Q99572 595 aaKnown RBP32.15■■■□□ 2.74
LINC00271-207ENST00000580741 KIAA1683Q9H0B3 1180 aa32.15■■■□□ 2.74
LINC00271-207ENST00000580741 MYPNQ86TC9 1320 aa32.15■■■□□ 2.74
LINC00271-207ENST00000580741 PEX10O60683 326 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 APPP05067 770 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 HOXD10P28358 340 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 GCLCP48506 637 aaPredicted RBP32.14■■■□□ 2.74
LINC00271-207ENST00000580741 NUCB1Q02818 461 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 PRKCZQ05513 592 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 TMEM179Q6ZVK1 233 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 SH3TC2Q8TF17 1288 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 EVI5LQ96CN4 794 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 C12orf42Q96LP6 360 aa32.14■■■□□ 2.74
LINC00271-207ENST00000580741 A0A1W2PRG0 241 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 MINDY4BA8MYZ0 360 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 TDO2P48775 406 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 USP14P54578 494 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 PRMT2P55345 433 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 GIMAP6Q6P9H5 292 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 TAOK2Q9UL54 1235 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 GABRQQ9UN88 632 aa32.13■■■□□ 2.73
LINC00271-207ENST00000580741 GNAT2P19087 354 aa32.12■■■□□ 2.73
LINC00271-207ENST00000580741 HERVK_113P62684 666 aa32.12■■■□□ 2.73
LINC00271-207ENST00000580741 MLLT1Q03111 559 aaPredicted RBP32.12■■■□□ 2.73
LINC00271-207ENST00000580741 SBK1Q52WX2 424 aa32.12■■■□□ 2.73
LINC00271-207ENST00000580741 CCDC129Q6ZRS4 1044 aa32.12■■■□□ 2.73
LINC00271-207ENST00000580741 MYH8P13535 1937 aa32.12■■■□□ 2.73
LINC00271-207ENST00000580741 TNPO2O14787 897 aaKnown RBP32.11■■■□□ 2.73
LINC00271-207ENST00000580741 MYCP01106 439 aaPredicted RBP32.11■■■□□ 2.73
LINC00271-207ENST00000580741 VCAM1P19320 739 aa32.11■■■□□ 2.73
LINC00271-207ENST00000580741 RAET1EQ8TD07 263 aa32.11■■■□□ 2.73
LINC00271-207ENST00000580741 ZNF333Q96JL9 665 aa32.11■■■□□ 2.73
LINC00271-207ENST00000580741 MGAMO43451 1857 aa32.1■■■□□ 2.73
LINC00271-207ENST00000580741 CCDC17Q96LX7 622 aa32.1■■■□□ 2.73
LINC00271-207ENST00000580741 TXNRD2Q9NNW7 524 aa32.1■■■□□ 2.73
LINC00271-207ENST00000580741 PATL2C9JE40 543 aaKnown RBP32.09■■■□□ 2.73
LINC00271-207ENST00000580741 ICA1Q05084 483 aa32.09■■■□□ 2.73
LINC00271-207ENST00000580741 PLEKHM2Q8IWE5 1019 aa32.09■■■□□ 2.73
LINC00271-207ENST00000580741 IFNL3Q8IZI9 196 aa32.09■■■□□ 2.73
LINC00271-207ENST00000580741 POTEFA5A3E0 1075 aa32.08■■■□□ 2.73
LINC00271-207ENST00000580741 NBPF11Q86T75 865 aa32.08■■■□□ 2.73
LINC00271-207ENST00000580741 SIAH1Q8IUQ4 282 aa32.08■■■□□ 2.73
LINC00271-207ENST00000580741 MORF4L1Q9UBU8 362 aa32.08■■■□□ 2.73
LINC00271-207ENST00000580741 BRCA2P51587 3418 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 TRIM6-TRIM34B2RNG4 842 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L15C9J2P7 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L13C9JLJ4 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L11C9JVI0 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L18D6R9N7 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L22D6RA61 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L17D6RBQ6 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L19D6RCP7 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L20D6RJB6 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 USP17L24Q0WX57 530 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 POTEEQ6S8J3 1075 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 RPAP3Q9H6T3 665 aaPredicted RBP32.07■■■□□ 2.72
LINC00271-207ENST00000580741 ROBO3Q96MS0 1386 aa32.07■■■□□ 2.72
LINC00271-207ENST00000580741 KIAA0100Q14667 2235 aaKnown RBP32.06■■■□□ 2.72
LINC00271-207ENST00000580741 FLT3LGP49771 235 aa32.06■■■□□ 2.72
LINC00271-207ENST00000580741 PAGR1Q9BTK6 254 aa32.06■■■□□ 2.72
LINC00271-207ENST00000580741 NACAP1Q9BZK3 213 aa32.06■■■□□ 2.72
LINC00271-207ENST00000580741 RBPJLQ9UBG7 517 aa32.06■■■□□ 2.72
LINC00271-207ENST00000580741 RASA1P20936 1047 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 ATP2B2Q01814 1243 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 KIAA1755Q5JYT7 1200 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 CATSPERGQ6ZRH7 1159 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 RILPL2Q969X0 211 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 FAM227BQ96M60 508 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 MKNK2Q9HBH9 465 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 ARHGEF10LQ9HCE6 1279 aa32.05■■■□□ 2.72
LINC00271-207ENST00000580741 FOXP2O15409 715 aa32.04■■■□□ 2.72
LINC00271-207ENST00000580741 GRK4P32298 578 aa32.04■■■□□ 2.72
LINC00271-207ENST00000580741 COA7Q96BR5 231 aa32.04■■■□□ 2.72
LINC00271-207ENST00000580741 NAPBQ9H115 298 aa32.04■■■□□ 2.72
LINC00271-207ENST00000580741 A0A0D9SFI3 127 aa32.03■■■□□ 2.72
LINC00271-207ENST00000580741 PRDM1O75626 825 aa32.03■■■□□ 2.72
LINC00271-207ENST00000580741 VPS53Q5VIR6 699 aa32.03■■■□□ 2.72
LINC00271-207ENST00000580741 GPRC5AQ8NFJ5 357 aa32.03■■■□□ 2.72
LINC00271-207ENST00000580741 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.03■■■□□ 2.72
LINC00271-207ENST00000580741 DOCK3Q8IZD9 2030 aa32.02■■■□□ 2.72
LINC00271-207ENST00000580741 EEF2P13639 858 aaKnown RBP32.02■■■□□ 2.72
LINC00271-207ENST00000580741 Q3C1V9 767 aa32.02■■■□□ 2.72
LINC00271-207ENST00000580741 SPICE1Q8N0Z3 855 aa32.02■■■□□ 2.72
LINC00271-207ENST00000580741 OSBPL3Q9H4L5 887 aa32.02■■■□□ 2.72
LINC00271-207ENST00000580741 TMX2Q9Y320 296 aa32.02■■■□□ 2.72
LINC00271-207ENST00000580741 ERVK-9P63128 1117 aa32.01■■■□□ 2.71
LINC00271-207ENST00000580741 ERVK-24P63145 666 aa32.01■■■□□ 2.71
LINC00271-207ENST00000580741 GTF3C2Q8WUA4 911 aaPredicted RBP32.01■■■□□ 2.71
LINC00271-207ENST00000580741 KANSL2Q9H9L4 492 aa32.01■■■□□ 2.71
LINC00271-207ENST00000580741 HELLSQ9NRZ9 838 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms